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Table 2 LOXL 1 SNPs high risk allele frequencies in different populations

From: Pseudoexfoliation syndrome, a systemic disorder with ocular manifestations

Population

Group

Cohort size

rs3825942 G

Odds ratio (OR)

Pvalue

rs1048661 G

Odds ratio (OR)

Pvalue

Reference

   

Allele frequency

  

Allele frequency

   

Iceland

Control

14,474

0.847

  

0.651

  

[28]

PXS

55

0.982

10.10 (4.02 – 25.36)

8.5 × 10−7

0.789

2.02 (1.32 – 3.09)

1.3 × 10−3

PXG

75

0.987

13.23 (5.59 – 31.29)

4. × 10−9

0.827

2.56 (1.74 – 3.77)

1.8 × 10−6

Sweden

Control

198

0.879

  

68

  

[28]

PXS

NA

NA

  

NA

  

PXG

199

0.995

27.28 (11.44 – 65.07)

9.1 × 10−14

0.834

2.39 (1.72 – 3.34)

2.7 × 10−7

USA

Control

235

0.844

  

0.665

  

[34]

PXS

 

NA

  

NA

  

PXG

50

0.939

3.05(1.20 – 7.76)

0.0194

0.787

1.86(1.10, 3.15)

0.0222

India

Control

97

0.74

  

0.63

  

[30]

PXS and PXG

52

0.92

 

0.0001

0.72

 

0.156

Japan

Control

172

0.863

  

0.503*

   

PXS

103

0.985

10.71 (3.29 – 34.87)

1.49 *10−7

0.932*

13.56 (7.57 – 24.27)

3.39 *10−28

[29]

PXG

106

0.986

11.02 (3.39 – 35.9)

1.40 *10−7

0.962*

25.21 (12.06 – 52.69)

1.44* 10−34

Chinese

Control

171

0.918

  

0.444

  

PXS and PXG

62

0.992

1.92 (1.25 – 2.96)

0.0034

0.524

1.92 (1.25 – 2.96)

0.0034

[77]

German

Control

348

0.857

  

0.644

   

PXS

206

0.948

3.06 (1.87 – 4.99)

3.15 *10−6

0.787

2.04 (1.54 – 2.71)

7.08 * 10−7

[78]

PXG

311

0.953

3.41 (2.22 – 5.24)

4.78 *10−9

0.839

2.89 (2.21 – 3.77)

1.40 *10−15

 

Italian

Control

70

0.821

  

0.693

   

PXS

76

1.000

∞

5.08 *10−8

0.842

2.36 (1.34 – 4.16)

0.0024

[78]

PXG

133

1.000

∞

1.96 *10−12

0.815

1.96 (1.22 – 3.15)

0.0053

 

Australian

Control

86

0.84

  

0.66

   

PXS

335

0.95

3.81 (1.88 – 9.02)

7.83*10−5

0.78

1.86 (1.27 – 2.76)

8.49*10−4

[79]

PXG

 

NA

  

NA

   

Saudi

Control

101

0.817

  

0.762

  

[80]

 

PXS

NA

NA

  

NA

   
 

PXG

93

0.968

 

0.000005

0.876

 

0.0056

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