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Table 2 qPCR validation primer information for EBV cells genomic DNA

From: Copy number variation in CEP57L1 predisposes to congenital absence of bilateral ACL and PCL ligaments

Gene name

Gene

Amplicon positiona

UPL probe #

Left primerb

Right primerb

CEP57L1

Centrosomal protein 57 kDa-like 1

Amplicon located in intronic genomic DNA between exons 6 and 7 (chr6:109474636-109474742) chr6:109474636-109474742

75

gaggggtcccgttatgttg

gcgtggtggctcatacttg

GAPDH

Glyceraldehyde 3-phosphate dehydrogenase

chr12: 6645563-6645625

10

gctgcattcgccctctta

gaggctcctccagaatatgtga

SNCA

Synuclein, alpha

chr4: 90743466-90743537

68

gctgagaagaccaaagagcaa

ctgggctactgctgtcacac

  1. aAmplicon position as reported by UCSC genome browser (hg19) in silico PCR tool
  2. bAll primers are listed 5′ to 3′