Tissue dataset | TCGA cancer | CCL | Organoids | Controls | TCGA healthy test |
---|---|---|---|---|---|
Dataset source: | Â | Â | Â | Â | Â |
Colorectum | 100 | 49 | 11 | 10 | 16 |
Oesophagus | 100 | 35 | 4 | 10 | 8 |
Lung | 100 | 61 | 1 | 10 | 16 |
Pancreas | 100 | 31 | 7 | 10 | 5 |
Stomach | 100 | 28 | 2 | 10* | 2 |
Total: | 500 | 204 | 25 | 50 | 47 |
Datasets used for analysis: | Â | Â | Â | Â | Â |
Colorectum | 95 | 49 | 11 | 10 | 16 |
Oesophagus | 92 | 35 | 4 | 8 | 8 |
Lung | 94 | 61 | 1 | 10 | 16 |
Pancreas | 97 | 31 | 7 | 4 | 5 |
Stomach | 98 | 28 | 2 | 10 | 2 |
Total: | 476 | 204 | 25 | 42 | 47 |
Datasets excluded: | 24 | 0 | 0 | 8 | 0 |
Colorectum | 5 | 0 | 0 | 0 | 0 |
Oesophagus | 8 | 0 | 0 | 2 | 0 |
Lung | 6 | 0 | 0 | 0 | 0 |
Pancreas | 3 | 0 | 0 | 6 | 0 |
Stomach | 2 | 0 | 0 | 10 | 0 |
Total: | 24 | 0 | 0 | 8 | 0 |