From: Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps
Distance threshold, G | 4 | 5 | 6 | 8 | 20 |
---|---|---|---|---|---|
No. of markers used | 248 | 262 | 276 | 286 | 298 |
% of markers used | 80 | 84 | 89 | 92 | 96 |
No. of clusters | 81 | 74 | 70 | 60 | 44 |
d(H, Ct, Cw) | 129 | 126 | 119 | 98 | 63 |
d(A, H*) + d(H*, H) | 4 + 10 = 14 | 3 + 11 = 14 | 4 + 12 = 16 | 1 + 12 = 13 | 2 + 6 = 8 |
d(A, Ct*) + d(Ct*, Ct) | 8 + 14 = 22 | 8 + 17 = 25 | 6 + 15 = 21 | 9 + 11 = 20 | 3 +7 = 10 |
d(A, Cw*) + d(Cw*,Cw) | 12 + 22 = 34 | 11 + 18 = 29 | 10 + 17 = 27 | 7 + 13 = 20 | 5 + 11 = 16 |
Tree score | 70 | 68 | 64 | 53 | 34 |