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Table 4 Presence or absence of Alu Yb inserts in non-human primate orthologous loci

From: Genome-wide analysis of the human Alu Yb-lineage

Alu element

Human

Common chimpanzee

Pygmy chimpanzee

Gorilla

Orangutan

Green monkey

Owl monkey

Types

Yb7AD231

+(Yb)

+(Sg)

+(Sg)

+(Sg)

+(Sg)

0

0

GC & Del

Yb7AD84

+(Yb)

+(Y)

+(Y)

+(Y)

+(Y)

+(Y)

0

GC

Yb8AC1233

+(Yb)

+(Y)

+(Y)

+(Y)

+(Y)

+(Y)

0

GC

Yb8AC914a

+(Yb)

0

+(Sx)

+(Sx)

0

0

0

GC

Yb7AD234

+(Yb)

-

-

-

-

0

+(Sc)

Ind

Yb7AD52

+(Yb)

Non-repetitive sequence

Non-repetitive sequence

Non-repetitive sequence

Non-repetitive sequence

0

0

Del

Yb8AC1737

+(Yb)

+(Sx)

+(Sx)

+(Sx)

+(Sx)

0

0

GC & Del

  1. +, Polymerase chain reaction (PCR) product indicates presence of Alu insert; -, small PCR product indicates absence of an Alu insert; 0, no PCR product of the locus was observed; GC, gene conversion; Ind, independent insertion; Del, Alu-mediated deletion.