TY - JOUR AU - Bazan, J. F. AU - Bacon, K. B. AU - Hardiman, G. PY - 1997 DA - 1997// TI - 'A new class of membrane-bound chemokine with a CX3C motif' JO - Nature VL - 385 UR - https://doi.org/10.1038/385640a0 DO - 10.1038/385640a0 ID - Bazan1997 ER - TY - JOUR AU - Pan, Y. AU - Lloyd, C. AU - Zhou, W. PY - 1997 DA - 1997// TI - 'Neurotactin, a membrane-anchored chemokine upregulated in brain inflammation [published erratum appears in Nature (1997), Vol. 389, p.100]' JO - Nature VL - 387 UR - https://doi.org/10.1038/42491 DO - 10.1038/42491 ID - Pan1997 ER - TY - JOUR AU - Yoshida, T. AU - Imai, T. AU - Kakizaki, H. PY - 1995 DA - 1995// TI - 'Molecular cloning of a novel C or gamma type chemokine, SCM-1' JO - FEBS Lett VL - 360 UR - https://doi.org/10.1016/0014-5793(95)00093-O DO - 10.1016/0014-5793(95)00093-O ID - Yoshida1995 ER - TY - JOUR AU - Yoshida, T. AU - Imai, T. AU - Kakizaki, H. PY - 1998 DA - 1998// TI - 'Identification of single C motif-1/lymphotactin receptor XCR1' JO - J Biol Chem VL - 273 UR - https://doi.org/10.1074/jbc.273.26.16551 DO - 10.1074/jbc.273.26.16551 ID - Yoshida1998 ER - TY - JOUR AU - Cocchi, F. AU - DeVico, A. L. AU - Garzino-Demo, A. PY - 1995 DA - 1995// TI - 'Identification of RANTES, MIP-1 alpha, and MIP-1 beta as the major HIV-suppressive factors produced by CD8 + T cells' JO - Science VL - 270 UR - https://doi.org/10.1126/science.270.5243.1811 DO - 10.1126/science.270.5243.1811 ID - Cocchi1995 ER - TY - JOUR AU - Dean, M. AU - Carrington, M. AU - Winkler, C. PY - 1996 DA - 1996// TI - 'Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene. Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study' JO - Science VL - 273 UR - https://doi.org/10.1126/science.273.5283.1856 DO - 10.1126/science.273.5283.1856 ID - Dean1996 ER - TY - JOUR AU - Smith, M. W. AU - Carrington, M. AU - Winkler, C. PY - 1997 DA - 1997// TI - 'CCR2 chemokine receptor and AIDS progression' JO - Nat Med VL - 3 UR - https://doi.org/10.1038/nm1097-1052c DO - 10.1038/nm1097-1052c ID - Smith1997 ER - TY - JOUR AU - Kostrikis, L. S. AU - Huang, Y. AU - Moore, J. P. PY - 1998 DA - 1998// TI - 'A chemokine receptor CCR2 allele delays HIV-1 disease progression and is associated with a CCR5 promoter mutation' JO - Nature Med VL - 4 UR - https://doi.org/10.1038/nm0398-350 DO - 10.1038/nm0398-350 ID - Kostrikis1998 ER - TY - JOUR AU - Martin, M. P. AU - Dean, M. AU - Smith, H. W. PY - 1998 DA - 1998// TI - 'Genetic acceleration of AIDS progression by a promoter variant of CCR5' JO - Science VL - 282 UR - https://doi.org/10.1126/science.282.5395.1907 DO - 10.1126/science.282.5395.1907 ID - Martin1998 ER - TY - JOUR AU - Winkler, C. AU - Modi, W. AU - Smith, H. W. PY - 1998 DA - 1998// TI - 'Genetic restriction of AIDS pathogenesis by an SDF-1 chemokine gene variant. ALIVE Study, Hemophilia Growth and Development Study (HGDS), Multicenter AIDS Cohort Study (MACS), Multicenter Hemophilia Cohort Study (MHCS), San Francisco City Cohort (SFCC)' JO - Science VL - 279 UR - https://doi.org/10.1126/science.279.5349.389 DO - 10.1126/science.279.5349.389 ID - Winkler1998 ER - TY - JOUR AU - An, P. AU - Martin, M. P. AU - Nelson, G. W. PY - 2000 DA - 2000// TI - 'Influence of CCR5 promoter haplotypes on AIDS progression in African-Americans' JO - Aids VL - 14 UR - https://doi.org/10.1097/00002030-200009290-00007 DO - 10.1097/00002030-200009290-00007 ID - An2000 ER - TY - JOUR AU - Strieter, R. M. AU - Polverini, P. J. AU - Arenberg, D. A. PY - 1995 DA - 1995// TI - 'Role of C-X-C chemokines as regulators of angiogenesis in lung cancer' JO - J Leukoc Biol VL - 57 ID - Strieter1995 ER - TY - JOUR AU - Arenberg, D. A. AU - Kunkel, S. L. AU - Polverini, P. J. PY - 1996 DA - 1996// TI - 'Interferon-gamma-inducible protein 10 (IP-10) is an angiostatic factor that inhibits human non-small cell lung cancer (NSCLC) tumorigenesis and spontaneous metastases' JO - J Exp Med VL - 184 UR - https://doi.org/10.1084/jem.184.3.981 DO - 10.1084/jem.184.3.981 ID - Arenberg1996 ER - TY - JOUR AU - Moore, B. B. AU - Arenberg, D. A. AU - Addison, C. L. PY - 1998 DA - 1998// TI - 'Tumor angiogenesis is regulated by CXC chemokines' JO - J Lab Clin Med VL - 132 UR - https://doi.org/10.1016/S0022-2143(98)90004-X DO - 10.1016/S0022-2143(98)90004-X ID - Moore1998 ER - TY - JOUR AU - Wang, J. M. AU - Chertov, O. AU - Proost, P. PY - 1998 DA - 1998// TI - 'Purification and identification of chemokines potentially involved in kidney-specific metastases by a murine lymphoma variant: Induction of migration and NFKB activation' JO - Inlt J Cancer VL - 75 UR - https://doi.org/3.0.CO;2-6 DO - 3.0.CO;2-6 ID - Wang1998 ER - TY - JOUR AU - Muller, A. AU - Homey, B. AU - Soto, H. PY - 2001 DA - 2001// TI - 'Involvement of chemokine receptors in breast cancer metastasis' JO - Nature VL - 410 UR - https://doi.org/10.1038/35065016 DO - 10.1038/35065016 ID - Muller2001 ER - TY - JOUR AU - Gordon, D. AU - Abajian, C. AU - Green, P. PY - 1998 DA - 1998// TI - 'Consed: A graphical tool for sequence finishing' JO - Genome Res VL - 8 UR - https://doi.org/10.1101/gr.8.3.195 DO - 10.1101/gr.8.3.195 ID - Gordon1998 ER - TY - JOUR AU - Kwok, P. Y. AU - Carlson, C. AU - Yager, J. D. PY - 1994 DA - 1994// TI - 'Comparative analysis of human DNA variations by fluorescence-based sequencing of PCR products' JO - Genomics VL - 23 UR - https://doi.org/10.1006/geno.1994.1469 DO - 10.1006/geno.1994.1469 ID - Kwok1994 ER - TY - JOUR AU - Ewing, B. AU - Green, P. PY - 1998 DA - 1998// TI - 'Base-calling of automated sequencer traces using phred. II. Error probabilities' JO - Genome Res VL - 8 UR - https://doi.org/10.1101/gr.8.3.186 DO - 10.1101/gr.8.3.186 ID - Ewing1998 ER - TY - JOUR AU - Ewing, B. AU - Hillier, L. AU - Wendl, H. C. PY - 1998 DA - 1998// TI - 'Base-calling of automated sequencer traces using phred. II. Accuracy assessment' JO - Genome Res VL - 8 UR - https://doi.org/10.1101/gr.8.3.175 DO - 10.1101/gr.8.3.175 ID - Ewing1998 ER - TY - JOUR AU - Nickerson, D. A. AU - Tobe, V. O. AU - Taylor, S. L. PY - 1997 DA - 1997// TI - 'PolyPhred: Automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing' JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.14.2745 DO - 10.1093/nar/25.14.2745 ID - Nickerson1997 ER - TY - STD TI - NTH (2001-2003), dbSNP: National Center for Biotechnology Information, National Institutes of Health, [http://www.ncbi.nlm.nih.gov/SNP/] UR - http://www.ncbi.nlm.nih.gov/SNP/ ID - ref22 ER - TY - STD TI - Whitehead Institute (2001-2003), Primer 3.0: Whitehead Institute, [http://www-genome.wi.mit.edu/cgi-bin/primer/primer3_www.cgi] UR - http://www-genome.wi.mit.edu/cgi-bin/primer/primer3_www.cgi ID - ref23 ER - TY - STD TI - Genome Sequencing Centre (2001), Exo-SAP Protocol: Genome Sequencing Center, Washington University, [http://genome.wustl.edu/tools/protocols/] UR - http://genome.wustl.edu/tools/protocols/ ID - ref24 ER - TY - JOUR AU - Clark, V. J. AU - Metheny, N. AU - Dean, M. AU - Peterson, R. PY - 2001 DA - 2001// TI - 'Statistical estimation and pedigree analysis of CCR2-CCR5 haplotypes' JO - Hum Genet VL - 108 UR - https://doi.org/10.1007/s004390100512 DO - 10.1007/s004390100512 ID - Clark2001 ER - TY - JOUR AU - Morin, P. A. AU - Saiz, R. AU - Monjazeb, A. PY - 1999 DA - 1999// TI - 'High-throughput single nucleotide polymorphism genotyping by fluorescent 5' exonuclease assay' JO - Biotechniques VL - 544 ID - Morin1999 ER - TY - JOUR AU - O'Connell, J. R. AU - Weeks, D. E. PY - 1998 DA - 1998// TI - 'PEDCHECK: A program for identification of genotype incompatibilities in linkage analysis' JO - Am J Hum Genet VL - 63 UR - https://doi.org/10.1086/301904 DO - 10.1086/301904 ID - O'Connell1998 ER - TY - JOUR AU - Guo, S. W. AU - Thompson, E. A. PY - 1992 DA - 1992// TI - 'Performing the exact test of Hardy-Weinberg proportion for multiple alleles' JO - Biometrics VL - 48 UR - https://doi.org/10.2307/2532296 DO - 10.2307/2532296 ID - Guo1992 ER - TY - JOUR AU - Long, J. C. AU - Williams, R. C. AU - Urbanek, M. PY - 1995 DA - 1995// TI - 'An E-M algorithm and testing strategy for multiple-locus haplotypes' JO - Am J Hum Genet VL - 56 ID - Long1995 ER - TY - CHAP AU - Long, J. C. PY - 1999 DA - 1999// BT - 'Multiple locus haplotype analysis (MLOCUS, OBSHAP, PAIRWISE), software and documentation distributed by the author' PB - Section on Population Genetics and Linkage, Laboratory of Neurogenetics, NIAAA, National Institutes of Health CY - Bethesda, MD ID - Long1999 ER - TY - JOUR AU - Dempster, A. P. PY - 1977 DA - 1977// TI - 'Maximum-likelihood from incomplete data via the EM algorithm' JO - JR Stat Soc B VL - 39 ID - Dempster1977 ER - TY - JOUR AU - Peterson, R. J. AU - Goldman, D. PY - 1999 DA - 1999// TI - 'Effects of worldwide population subdivision on ALDH2 linkage disequilibrium' JO - Genome Res VL - 9 UR - https://doi.org/10.1101/gr.9.9.844 DO - 10.1101/gr.9.9.844 ID - Peterson1999 ER - TY - JOUR AU - Zhang, K. AU - Jin, L. PY - 2003 DA - 2003// TI - 'HaploBlockFinder: Haplotype block analyses' JO - Bioinformatics VL - 19 UR - https://doi.org/10.1093/bioinformatics/btg142 DO - 10.1093/bioinformatics/btg142 ID - Zhang2003 ER - TY - JOUR AU - Wang, N. AU - Akey, J. M. AU - Zhang, K. PY - 2002 DA - 2002// TI - 'Distribution of recombination crossovers and the origin of haplotype blocks: The interplay of population history, recombination, and mutation' JO - Am J Hum Genet VL - 71 UR - https://doi.org/10.1086/344398 DO - 10.1086/344398 ID - Wang2002 ER - TY - JOUR AU - Daly, M. J. AU - Rioux, J. D. AU - Schaffner, S. F. PY - 2001 DA - 2001// TI - 'High-resolution haplotype structure in the human genome' JO - Nat Genet VL - 29 UR - https://doi.org/10.1038/ng1001-229 DO - 10.1038/ng1001-229 ID - Daly2001 ER - TY - JOUR AU - Gabriel, S. B. AU - Schaffner, S. F. AU - Nguyen, H. PY - 2002 DA - 2002// TI - 'The structure of haplotype blocks in the human genome' JO - Science VL - 296 UR - https://doi.org/10.1126/science.1069424 DO - 10.1126/science.1069424 ID - Gabriel2002 ER - TY - JOUR AU - Excoffier, L. AU - Slatkin, M. PY - 1995 DA - 1995// TI - 'Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population' JO - Mol Biol Evol VL - 12 ID - Excoffier1995 ER - TY - JOUR AU - Fallin, D. AU - Schork, N. J. PY - 2000 DA - 2000// TI - 'Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data' JO - Am J Hum Genet VL - 67 UR - https://doi.org/10.1086/303069 DO - 10.1086/303069 ID - Fallin2000 ER - TY - JOUR AU - Rozas, J. AU - Rozas, R. PY - 1999 DA - 1999// TI - 'DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis' JO - Bioinformatics VL - 15 UR - https://doi.org/10.1093/bioinformatics/15.2.174 DO - 10.1093/bioinformatics/15.2.174 ID - Rozas1999 ER - TY - JOUR AU - Lewontin, R. C. PY - 1964 DA - 1964// TI - 'The interaction of selection and linkage. I. General considerations: Heterotic models' JO - Genetics VL - 49 ID - Lewontin1964 ER - TY - JOUR AU - Michalatos-Beloin, S. AU - Tishkoff, S. A. AU - Bentley, K. L. PY - 1996 DA - 1996// TI - 'Molecular haplotyping of genetic markers 10 kb apart by allele-specific long-range PCR' JO - Nucleic Acids Res VL - 24 UR - https://doi.org/10.1093/nar/24.23.4841 DO - 10.1093/nar/24.23.4841 ID - Michalatos-Beloin1996 ER - TY - JOUR AU - Tishkoff, S. A. AU - Dietzsch, E. AU - Speed, W. PY - 1996 DA - 1996// TI - 'Global patterns of linkage disequilibrium at the CD4 locus and modern human origins' JO - Science VL - 271 UR - https://doi.org/10.1126/science.271.5254.1380 DO - 10.1126/science.271.5254.1380 ID - Tishkoff1996 ER - TY - JOUR AU - Clark, A. G. AU - Weiss, K. M. AU - Nickerson, D. A. PY - 1998 DA - 1998// TI - 'Haplotype structure and population genetic inferences from nucleotide sequence variation in human lipoprotein lipase' JO - Am J Hum Genet VL - 63 UR - https://doi.org/10.1086/301977 DO - 10.1086/301977 ID - Clark1998 ER - TY - JOUR AU - Tishkoff, S. A. AU - Pakstis, A. J. AU - Ruano, G. AU - Kidd, K. K. PY - 2000 DA - 2000// TI - 'The accuracy of statistical methods for estimation of haplotype frequencies: An example from the CD4 locus' JO - Am J Hum Genet VL - 67 UR - https://doi.org/10.1086/303000 DO - 10.1086/303000 ID - Tishkoff2000 ER - TY - JOUR AU - McKeigue, P. M. PY - 2000 DA - 2000// TI - 'Efficiency of estimation of haplotype frequencies: Use of marker phenotypes of unrelated individuals versus counting of phase-known gametes' JO - Am J Hum Genet VL - 67 UR - https://doi.org/10.1086/316912 DO - 10.1086/316912 ID - McKeigue2000 ER - TY - JOUR AU - Xu, W. AU - Tse, H. F. AU - Chan, F. H. PY - 2002 DA - 2002// TI - 'New Bayesian discriminator for detection of atrial tachyarrhythmias' JO - Circulation VL - 105 UR - https://doi.org/10.1161/01.CIR.0000012349.14270.54 DO - 10.1161/01.CIR.0000012349.14270.54 ID - Xu2002 ER - TY - JOUR AU - Clark, A. G. PY - 1990 DA - 1990// TI - 'Inference of haplotypes from PCR-amplified samples of diploid populations' JO - Mol Biol Evol VL - 7 ID - Clark1990 ER - TY - JOUR AU - Stephens, M. AU - Smith, N. J. AU - Donnelly, P. PY - 2001 DA - 2001// TI - 'A new statistical method for haplotype reconstruction from population data' JO - Am J Hum Genet VL - 68 UR - https://doi.org/10.1086/319501 DO - 10.1086/319501 ID - Stephens2001 ER -