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Table 5 Relative efficiency of different maps and scaling factors for different populations

From: Cosmopolitan linkage disequilibrium maps

Population

Vkb

VLDU

Vcos

Relative effciency of kb map (VLDU/Vkb)

Relative effciency of COS map (VLDU/VCOS)

Scaling factor relative to COS map

AF

1.310

0.908

0.957

0.693

0.949

1.330

CA

1.534

0.774

0.843

0.504

0.918

0.925

CE

0.923

0.614

0.647

0.665

0.949

0.888

AS

0.817

0.532

0.583

0.651

0.913

1.029

  1. Vkb: Residual error variance on fitting pairwise data to the kilobase map; VLDU: residual error variance for the linkage disequilibrium unit map; VCOS: residual error variance for the individual population data fitted to the cosmopolitan sample map; AF: African-American; CA: UK Caucasians; CE: Utah CEPH founders; AS: Japanese and Chinese.
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Human Genomics

ISSN: 1479-7364