From: A survey of data mining methods for linkage disequilibrium mapping
Approach | Methods | Characteristics | ||
---|---|---|---|---|
Classification | Predictive | Haplotype and subject-oriented | Models interactions | |
Haplotype clustering | Spatial clustering [18] | Descriptive | Haplotype and subject-oriented | No interactions |
Phenotype clustering | MCA [19] | Predictive | Subject-oriented | No interactions |
Haplotype patterns | HPM [20] and derivatives,[21, 22, 26–28] TreeDT [30] | Descriptive | Haplotype-oriented | Can model few interactions |