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Table 1 NCI-60 microarray expression datasets

From: Genome-wide identification of genetic determinants for the cytotoxicity of perifosine

Dataset

Institution

Platform

No. of genes on chip

No. of genes analyseda

MP-6800

Millenium Pharmaceuticals, Inc.

Affymetrix Human 6800

7,451

2,955

GL-U95

Gene Logic, Inc.

Affymetrix U95

63,175

23,223

NP-U95

Novartis Pharmaceuticals, Inc.

Affymetrix U95A

12,626

10,063

NS-cDNA [41, 42]

NCI and Stanford University

cDNA array

9,703

5,291

  1. aGenes or probe sets that had missing data in more than six cell lines (10 per cent) were not included in the analysis datasets.
  2. NCI; National Cancer Institute.