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Figure 4 | Human Genomics

Figure 4

From: A general integrative genomic feature transcription factor binding site prediction method applied to analysis of USF1 binding in cardiovascular disease

Figure 4

Prediction scores distribution of potential USF1 -BSs. By scanning 5 kb upstream of TSSs of 23,105 RefSeq mRNAs in the human genome, 290,614 potential USF1-BSs were identified by the PWM scoring method. The prediction method generates a score for each potential USF1-BS identified by the PWM scoring method. These prediction scores range from 0 to 1 and correspond to the confidence of the model's prediction. A total of 24,010 predicted USF1-BSs were generated using the optimal prediction model with default prediction threshold (0.5). The data are represented as histograms of frequency at each 0.01 score interval.

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Human Genomics

ISSN: 1479-7364