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Table 3 Enriched biological processes and pathways in the genes containing II (TG/CA) n repeats

From: Exploring the relationship between polymorphic (TG/CA) n repeats in intron 1 regions and gene expression

Category

Database

Database ID

Name

Count

P

FDR

Pathway

KEGG

hsa:04020

Calcium signalling pathway

16

2.10E-04

4.10E-02

Biological process

GO

GO:0030001

Metal ion transport

25

1.20E-05

3.10E-02

  

GO:0030182

Neurone differentiation

18

1.40E-05

1.80E-02

  

GO:0006812

Cation transport

28

2.20E-05

1.90E-02

  

GO:0015672

Monovalent inorganic cation transport

21

2.50E-05

1.60E-02

 

PANTHER

BP00143

Cation transport

97

6.20E-11

1.40E-08

  

BP00142

Ion transport

57

4.10E-07

4.50E-05

  

BP00044

mRNA transcription regulation

160

8.90E-07

6.50E-05

  

BP00071

Proteolysis

90

4.60E-05

2.50E-03

  

BP00040

mRNA transcription

105

8.50E-05

3.70E-03

  

BP00102

Signal transduction

75

1.20E-04

4.50E-03

  

BP00141

Transport

34

3.40E-04

1.10E-02

  

BP00019

Lipid, fatty acid and steroid metabolism

24

4.10E-04

1.10E-02

  

BP00112

Calcium-mediated signalling

15

9.50E-04

2.10E-02

  

BP00063

Protein modification

53

9.90E-04

2.00E-02

  

BP00284

Haematopoiesis

6

1.10E-03

2.10E-02

  

BP00124

Cell adhesion

18

1.20E-03

2.10E-02

  

BP00199

Neurogenesis

25

1.80E-03

2.80E-02

  

BP00286

Cell structure

59

2.40E-03

3.50E-02

  

BP00064

Protein phosphorylation

43

2.90E-03

3.90E-02

  

BP00111

Intracellular signalling cascade

24

3.20E-03

4.00E-02

  

BP00060

Protein metabolism and modification

54

3.40E-03

4.10E-02