No prior | N(0, σ2) | N(Zπ, σ2) | N(0, σ2eZ'ψ) | N(Z'π, σ2eZ'ψ) | N(Z'π,σ2(I-ρA)-1) | |
---|---|---|---|---|---|---|
Genetic main effects | ||||||
G3: MTD | -0.370 (0.113) | -0.341 (0.111) | -0.352 (0.109) | -0.327 (0.112) | -0.340 (0.109) | -0.106 (0.114) |
G4: MTCH | -0.258 (0.133) | -0.229 (0.123) | -0.245 (0.124) | -0.216 (0.120) | -0.207 (0.117) | -0.304 (0.127) |
G9: SHMT | 0.300 (0.121) | 0.282 (0.112) | 0.272 (0.112) | 0.155 (0.109) | 0.336 (0.079) | 0.128 (0.112) |
G10: MTHFR | 0.335 (0.116) | 0.301 (0.110) | 0.313 (0.113) | 0.293 (0.110) | 0.245 (0.116) | 0.198 (0.114) |
G11: MS | 0.240 (0.112) | 0.206 (0.106) | 0.219 (0.114) | 0.106 (0.095) | 0.190 (0.102) | 0.060 (0.112) |
G12: SAHH | -0.809 (0.131) | -0.735 (0.126) | -0.760 (0.135) | -0.752 (0.128) | -0.760 (0.125) | -0.648 (0.127) |
G13: CBS | 1.492 (0.134) | 1.360 (0.123) | 1.417 (0.129) | 1.400 (0.129) | 1.419 (0.133) | 1.149 (0.123) |
Prior covariates | ||||||
π1: folate (mean) | -0.020 (0.638) | -0.668 (0.192) | -0.641 (0.453) | |||
π2: methionine (mean) | 0.115 (0.480) | -0.266 (0.151) | 0.203 (0.377) | |||
π3: connections (mean) | 0.000 (0.092) | 0.113 (0.027) | 0.022 (0.030) | |||
ψ1: folate (variance) | 0.171 (0.337) | -0.312 (1.536) | ||||
ψ2: methionine (variance) | -0.181 (0.327) | -0.913 (1.259) | ||||
ψ3: connections (variance) | 0.472 (0.185) | 0.901 (0.390) | ||||
Posterior variances and correlations | ||||||
σβ = SD(β|Z) | 0.492 (0.109) | 0.658 (0.143) | 1.175 (0.491) | 2.362 (2.714) | 0.877 (0.285) | |
σπ = SD(π) | 0.864 (0.385) | 0.858 (0.356) | 0.889 (0.403) | |||
σψ = SD(ψ) | 0.342 (0.059) | 1.350 (1.010) | ||||
ρ = corr(β|A) | 0.597 (0.170) |