Table S4 Function and regulation of prokaryotic large subunit ribosomal proteins
Protein Name | Organism | Function | Reference | Find online at |
|---|---|---|---|---|
RPL2 | E. coli | Zinc-binding protein | Katayama A, Tsujii A, Wada A, Nishino T, Ishihama A. Systematic search for zinc-binding proteins in Escherichia coli Eur. J. Biochem. 269(9):2403-2413. | |
RPL4 | E. coli | Allosterically regulates RNase E-dependent RNA degradation 'inhibiting RNase E-specific cleavage in vitro, stabilising mRNAs targeted by RNase E in vivo, and controlling plasmid DNA replication by stabilizing an antisense regulatory RNA normally attacked by RNase E' also upregulated in stress, which accompanies inactivation of RNase E and increased half-life of stress-responsive transcripts | Singh D, Chang SJ, Lin PH, Averina OV, Kaberdin VR, Lin-Chao S. (2009), Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli. Proc. Natl. Acad. Sci. USA. 106(3):864-869. Epub 2009 Jan 14. | |
RPL11 | E. coli | Involved in regulating the activity of (p)ppGpp synthetase I | Yang X, Ishiguro EE. (2001), Involvement of the N terminus of ribosomal protein L11 in regulation of the RelA protein of Escherichia coli. J. Bacteriol. 183(22):6532-6537. | |
RPL13 | E. coli | Zinc binding protein | Katayama A, Tsujii A, Wada A, Nishino T, Ishihama A. Systematic search for zinc-binding proteins in Escherichia coli. Eur. J. Biochem. 269(9):2403-2413. | |
RPL25 | E. coli/Bacillus subtilis | General stress protein Ctc: might be required for accurate translation under stress conditions | Schmalisch M, Langbein I, Stülke J. (2002), The general stress protein Ctc of Bacillus subtilis is a ribosomal protein. J. Mol. Microbiol. Biotechnol. 4(5):495-501. |