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Table 4 Univariate association between demographic, genetic factors and risk of choroidal neovascular (CNV) disease

From: Clinical validation of a genetic model to estimate the risk of developing choroidal neovascular age-related macular degeneration

  

Control

(822)

CNV

(1132)

Odds

(95% CI)

P-value

(Type 3)

c-statistic

Age (± SD)

 

76.4 (7.3)

76.5 (7.1)

1.001 (0.989-1.013)

0.87

0.50

Sex

F

451 (55%)

696 (61%)

1.313 (1.094-1.576)

0.0034

0.53

 

M

371 (45%)

436 (39%)

   

rs10490924

GG

520 (63.3%)

340 (30%)

0.061 (0.04-0.093)

< 0.0001

0.70

 

GT

269 (32.7%)

505 (44.6%)

0.175 (0.114-0.268)

  
 

TT

26 (3.2%)

279 (24.6%)

   
 

(blank)

7 (0.9%)

8 (0.7%)

   

rs1061170

CC

114 (13.9%)

394 (34.8%)

5.184 (3.934-6.831)

< 0.0001

0.65

 

CT

408 (49.6%)

535 (47.3%)

1.967 (1.575-2.456)

  
 

TT

294 (35.8%)

196 (17.3%)

   
 

(blank)

6 (0.7%)

7 (0.6%)

   

rs10922153

GG

189 (23%)

498 (44%)

4.819 (3.64-6.382)

< 0.0001

0.64

 

GT

418 (50.9%)

515 (45.5%)

2.254 (1.738-2.922)

  
 

TT

214 (26%)

117 (10.3%)

   
 

(blank)

1 (0.1%)

2 (0.2%)

   

rs12144939

GG

504 (61.3%)

930 (82.2%)

7.996 (3.842-16.639)

< 0.0001

0.61

 

GT

275 (33.5%)

192 (17%)

3.025 (1.432-6.391)

  
 

TT

39 (4.7%)

9 (0.8%)

   
 

(blank)

4 (0.5%)

1 (0.1%)

   

rs1409153

AA

282 (34.3%)

192 (17%)

0.203 (0.154-0.267)

< 0.0001

0.64

 

AG

420 (51.1%)

539 (47.6%)

0.382 (0.3-0.487)

  
 

GG

118 (14.4%)

396 (35%)

   
 

(blank)

2 (0.2%)

5 (0.4%)

   

rs1750311

AA

95 (11.6%)

53 (4.7%)

0.289 (0.202-0.415)

< 0.0001

0.59

 

AC

373 (45.4%)

411 (36.3%)

0.572 (0.472-0.692)

  
 

CC

346 (42.1%)

667 (58.9%)

   
 

(blank)

8 (1%)

1 (0.1%)

   

rs2230199

CC

521 (63.4%)

621 (54.9%)

0.447 (0.289-0.691)

< 0.0001

0.55

 

CG

267 (32.5%)

428 (37.8%)

0.601 (0.385-0.94)

  
 

GG

30 (3.6%)

80 (7.1%)

   
 

(blank)

4 (0.5%)

3 (0.3%)

   

rs2274700

AA

144 (17.5%)

48 (4.2%)

0.128 (0.09-0.183)

< 0.0001

0.66

 

AG

403 (49%)

378 (33.4%)

0.361 (0.296-0.441)

  
 

GG

268 (32.6%)

696 (61.5%)

   
 

(blank)

7 (0.9%)

10 (0.9%)

   

rs2990510

GG

78 (9.5%)

183 (16.2%)

2.082 (1.541-2.813)

< 0.0001

0.55

 

GT

389 (47.3%)

544 (48.1%)

1.241 (1.023-1.506)

  
 

TT

355 (43.2%)

400 (35.3%)

   
 

(blank)

(0%)

5 (0.4%)

   

rs403846

AA

137 (16.7%)

445 (39.3%)

5.059 (3.848-6.652)

< 0.0001

0.65

 

AG

424 (51.6%)

521 (46%)

1.914 (1.515-2.418)

  
 

GG

257 (31.3%)

165 (14.6%)

   
 

(blank)

4 (0.5%)

1 (0.1%)

   

rs641153

CC

644 (78.3%)

984 (86.9%)

2.674 (1.115-6.41)

< 0.0001

0.55

 

CT

159 (19.3%)

129 (11.4%)

1.42 (0.578-3.489)

  
 

TT

14 (1.7%)

8 (0.7%)

   
 

(blank)

5 (0.6%)

11 (1%)

   

rs698859

AA

120 (14.6%)

235 (20.8%)

1.644 (1.257-2.15)

0.0012

0.54

 

AG

403 (49%)

541 (47.8%)

1.127 (0.922-1.378)

  
 

GG

298 (36.3%)

355 (31.4%)

   
 

(blank)

1 (0.1%)

1 (0.1%)

   

rs9332739

CC

2 (0.2%)

1 (0.1%)

0.348 (0.032-3.85)

0.0022

0.52

 

CG

72 (8.8%)

55 (4.9%)

0.532 (0.37-0.766)

  
 

GG

745 (90.6%)

1069 (94.4%)

   
 

(blank)

3 (0.4%)

7 (0.6%)

   
  1. CI, confidence interval