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Table 1 List of the SNPs found in dbSNP database for MDM2 promoter

From: Identification of functional DNA variants in the constitutive promoter region of MDM2

Rs numbera

Positionb

SNPs IDc

MAFd

rs1144944

g.67,486,752 G > A

−1494

25%

rs3730485

g.67,487,038_67,487,077del

40 bp indel (−1208 to −1169)

37%

rs2904506

g.67,487,080 T > G

−1166

-

rs3930427

g.67,487,082 C > G

−1164

-

rs3730486

g.67,487,509 C > T

−737

0%

rs3730487

g.67,487,563A > G

−683

0%

rs937282

g.67,488,064 C > G

−182

50%

rs3730491

g.67,488,095 C > T

−151

0%

rs2279744e

g.67,488,847 T > G

+601

35%

  1. aFrom dbSNP build 128.
  2. bNCBI Build 36.1.
  3. cPosition relative to the transcription start site (based on reference sequence mRNA).
  4. dMinor allele frequencies (MAF) were calculated with 91 unrelated European individuals in this study.
  5. eFor comparison purposes, we included SNP309 (+601 in our nomenclature) associated with the internal promoter P2.