Skip to main content

Table 1 Sample size for available DNA and RNA sequencing data in primary tumors and paired control samples

From: Viral expression associated with gastrointestinal adenocarcinomas in TCGA high-throughput sequencing data

Cohort

Primary tumor

Matched controls

   

Blood

Solid tissue

 

RNA

DNA

DNA

DNA

AML, acute myeloid leukemia

123

nt

nt

nt

COAD, colon adenocarcinoma

194

77

56

16

KIRK, kidney renal clear carcinoma

132

nt

nt

nt

KIRP, kidney renal papillary cell carcinoma

15

nt

nt

nt

LUAD, lung adenocarcinoma

58

nt

nt

nt

LUSK, lung squamous cell carcinoma

151

nt

nt

nt

READ, rectum adenocarcinoma

71

40

35

4

STAD, stomach adenocarcinoma

57

3

0

2

UCEC, uterine corpus endometrioid carcinoma

157

nt

nt

nt

  1. Control samples were derived from either whole blood or adjacent normal tissue (not both) from the same patient. nt, not tested.