From: QGRS-Conserve: a computational method for discovering evolutionarily conserved G-quadruplex motifs
Homologous exome | QGRS distribution | ||
---|---|---|---|
Tetrads | |||
2 | 3 | 4+ | |
Pan troglodytes (14317) | Â | Â | Â |
 Entire mRNA | 255453 (75%) | 16731 (68%) | 612 (61%) |
 5′-UTR | 28398 (65%) | 3512 (58%) | 165 (53%) |
 CDS | 170536 (78%) | 6887 (75%) | 195 (75%) |
 3′-UTR | 61244 (72%) | 6747 (68%) | 260 (59%) |
Canis lupus familiaris (14513) | Â | Â | Â |
 Entire mRNA | 132440 (36%) | 5121 (19%) | 144 (13%) |
 5′-UTR | 6249 (14%) | 635 (10%) | 25 (7%) |
 CDS | 121915 (52%) | 3744 (38%) | 91 (33%) |
 3′-UTR | 5996 (7%) | 858 (8%) | 33 (7%) |
Mus musculus (15231) | Â | Â | Â |
 Entire mRNA | 156152 (41%) | 6461 (23%) | 200 (17%) |
 5′-UTR | 13600 (29%) | 1367 (20%) | 63 (17%) |
 CDS | 128755 (52%) | 3238 (31%) | 75 (25%) |
 3′-UTR | 16543 (18%) | 2010 (18%) | 67 (12%) |
Danio rerio (10963) | Â | Â | Â |
 Entire mRNA | 29001 (10%) | 198 (1%) | (0%) |
 5′-UTR | 391 (1%) | 6 (<1%) | (0%) |
 CDS | 28580 (16%) | 191 (3%) | (0%) |
 3′-UTR | 188 (<1%) | 4 (<1%) | (0%) |
Drosophila melanogaster (4407) | Â | Â | Â |
 Entire mRNA | 5970 (6%) | 29 (<1%) | (0%) |
 5′-UTR | 153 (1%) | 1 (<1%) | (0%) |
 CDS | 5798 (9%) | 26 (1%) | (0%) |
 3′-UTR | 42 (<1%) | 2 (<1%) | (0%) |
Caenorhabditis elegans (3035) | Â | Â | Â |
 Entire mRNA | 1543 (2%) | (0%) | (0%) |
 5′-UTR | 13 (<1%) | (0%) | (0%) |
 CDS | 1534 (4%) | (0%) | (0%) |
 3′-UTR | 5 (<1%) | (0%) | (0%) |
Kluyveromyces lactis NRRL Y-1140 (1298) | Â | Â | Â |
 Entire mRNA | 444 (2%) | (0%) | (0%) |
 5′-UTR | 1 (<1%) | (0%) | (0%) |
 CDS | 443 (3%) | (0%) | (0%) |
 3′-UTR | (0%) | (0%) | (0%) |