Skip to main content

Table 3 The gene complexes which are potentially associated to cancer processes

From: Whole exome sequencing of a single osteosarcoma case—integrative analysis with whole transcriptome RNA-seq data

Complex name

p value

Number of genes associated

Number of variances found

Tumour tissue

Control tissue

Mucin

9.54E-05

3: MUC2, MUC4, MUC6

27

1

0

Bcl9-Cbp/p300-Ctnnb1-Lef/Tcf

2.46E-03

2: CREBBP, TCF3

2

1

0

Sox

4.55E-03

2: SOX7, SOX10

2

1

0

Cholesterol monooxygenase (side-chain-cleaving)

1.06E-02

1

1

1

0

CYP11A

1.06E-02

1

1

1

0

Sarcosine dehydrogenase

1.06E-02

1

1

1

0

Ctbp

1.59E-02

1

7

1

0

Cbp/p300

1.59E-02

1

1

1

0

Dimethylglycine dehydrogenase

1.59E-02

1

1

1

0

DRD1/5

1.59E-02

1

1

1

0

MAGI

2.64E-02

1

2

1

1

Magi-Pten

3.68E-02

1

2

1

1

Fumarylacetoacetase

1.06E-02

1

1

1

1

  1. There are both somatic and germline cancer driver SNVs found in the tumour and control tissues.