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Table 7 Focal-scale CNAs detected in WGS and WES

From: Copy number alterations detected by whole-exome and whole-genome sequencing of esophageal adenocarcinoma

 

WGS

WES

All CNAs

21,197/3675

4371/144

Filtered CNAs

19,694/3456

3655/121

Small CNAs (<200 k)

11,480/2175

1201/36

Small and intron CNAs

7452/1603

0/0

  1. A number before/indicates how many CNAs detected in the specific platform; a number after/indicates how many CNAs are more frequently detected in the platform. Filtered CNAs represent detected CNAs with p-value < 0.05. Small and Intron CNAs are CNAs with width < 200 k and only cover introns
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Human Genomics

ISSN: 1479-7364