Table 3 Synthetic paired-end Illumina sequencing datasets simulated using ART
Organism (dataset ID) | Accession number of reference genome assembly | ART simulation parameter | Genome size (MB) | |||
|---|---|---|---|---|---|---|
Read length (bp) | Genome coverage | Fragment/insert size | Error rate (%) | |||
Escherichia coli (EC-1) | GCF_000005845.2 (ASM584v2) | 36 | 70× | 200 | 0.866 | 4.6 |
Escherichia coli (EC-2) | GCF_000005845.2 (ASM584v2) | 36 | 20× | 200 | 0.866 | 4.6 |
Escherichia coli (EC-3) | GCF_000005845.2 (ASM584v2) | 100 | 20× | 200 | 0.952 | 4.6 |
Bacillus cereus (BC-1) | GCF_000007825.1 (ASM782v1) | 56 | 50× | 200 | 0.175 | 5.4 |
Bacillus cereus (BC-2) | GCF_000007825.1 (ASM782v1) | 100 | 120× | 300 | 0.109 | 5.4 |
Drosophila melanogaster (DM) | GCF_000001215.4 (Release 6) | 100 | 10× | 300 | 0.854 | 143 |