Fig. 2From: Inferring clonal structure in HTLV-1-infected individuals: towards bridging the gap between analysis and visualizationClone size and integration sites in three representative individuals. Individuals are indicated at the top, followed by sample numbers and disease states at times 1 and 2. The number of integration sites is indicated beside color-coded representations of clone size. Clones with identical integration sites are shown in boxes color-coded for clone size and connected by dashed lines. a Individual 4 remained an asymptomatic carrier (AC) over time and had a large number of integration sites that fluctuated over time. b Individual 11 progressed from smoldering (SM) to chronic ATL. The integration sites of the two largest clones were identical over time. c Individual 16 progressed from SM to acute ATL. The integration site of the largest clone was identical over time. Results for other samples are shown in Additional file 2: Figure S3Back to article page