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Fig. 2 | Human Genomics

Fig. 2

From: Inferring clonal structure in HTLV-1-infected individuals: towards bridging the gap between analysis and visualization

Fig. 2

Clone size and integration sites in three representative individuals. Individuals are indicated at the top, followed by sample numbers and disease states at times 1 and 2. The number of integration sites is indicated beside color-coded representations of clone size. Clones with identical integration sites are shown in boxes color-coded for clone size and connected by dashed lines. a Individual 4 remained an asymptomatic carrier (AC) over time and had a large number of integration sites that fluctuated over time. b Individual 11 progressed from smoldering (SM) to chronic ATL. The integration sites of the two largest clones were identical over time. c Individual 16 progressed from SM to acute ATL. The integration site of the largest clone was identical over time. Results for other samples are shown in Additional file 2: Figure S3

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