Table 1 Genome-scale human-specific core promoter trinucleotide STRs
Human gene symbol | Ensembl transcript ID | Variant no. | STR formula | |
|---|---|---|---|---|
ADCY6 | ENST00000307885.4 | 201 | − 48 (CCA)3 | |
AMY1C | ENST00000370079.3 | 201 | − 79 (ATT)3 | |
APBB1 | ENST00000311051.7 | 202 | − 11 (GCC)3 | |
BRINP2 (FAM5B) | ENST00000361539.4 | 201 | − 26 (GGC)5 | |
BVES | ENST00000446408.2 | 203 | − 35 (CCT)3 | |
CCDC178 (C18orf34) | ENST00000300227.12 | 201 | − 79 (AGC)3 | − 57 (CGC)5 |
CDH4 | ENST00000543233.2 | 201 | − 31 (CCT)3 | |
CIAPIN1 | ENST00000563341.1 | 202 | − 39 (CCT)3 | |
CNTNAP2 | ENST00000361727.7 | 201 | − 98 (TGC)3 | |
CST4 | ENST00000217423.3 | 201 | − 83 (GGA)3 | |
CYP4A11 | ENST00000310638.8 | 201 | − 86 (CCT)3 | |
C1orf204 | ENST00000368102.5 | 201 | − 11 (AAG)3 | |
C22orf24 | NM_015372.2.1 | − 98 (GCA)3 | ||
C3AR1 | ENST00000546241.1 | 202 | − 70 (AGA)3 | |
DDX58 | ENST00000379868.5 | 201 | − 33 (CCT)3 | |
ECSCR | NM_001077693.3.1 | − 121 (CCA)3 | ||
GRIN2D | ENST00000263269.3 | 201 | − 67 (GCC)3 | |
GSDMB | ENST00000394175.6 | 203 | − 55 (GGC)3 | |
INPP4B | ENST00000503927.5 | 202 | − 88 (CGC)3 | |
KBTBD12 | ENST00000407609.7 | 204 | − 57 (CCT)3 | |
KIAA1211 | ENST00000504228.5 | 203 | − 81 (AAG)3 | |
KRAS | ENST00000311936.7 | 202 | − 89 (GAA)3 | |
KTN1 | ENST00000395308.5 | 202 | − 70 (GCG)9 | |
LACTBL1 | ENST00000426928.6 | 201 | − 58 (GAA)3 | |
LCE2B | ENST00000368780.3 | 201 | − 79 (CCT)3 | |
LCOR (C10orf12) | ENST00000356016.7 | 202 | − 97 (CCT)3 | − 108 (GCC)3 |
MPRIP | ENST00000466186.2 | 209 | − 88 (GCA)11 | |
MSANTD3 (C9orf30) | ENST00000374885.5 | 201 | − 25 (GCC)7 | |
NPAS1 | ENST00000439365.6 | 201 | − 135 (GAA)9 | |
OR4X1 | ENST00000320048.1 | 201 | − 100 (GAT)3 | |
PABPC1L2B | ENST00000373521.3 | 201 | − 60 (GCC)3 | |
PAQR9 | ENST00000498470.1 | 203 | − 29 (TGC)3 | |
PRSS1 | ENST00000492062.1 | 205 | − 96 (GAT)3 | |
RGPD6 | ENST00000455695.1 | 205 | − 70 (GGC)5 | |
RNF215 | ENST00000215798.10 | 201 | − 123 (GCT)5 | |
R3HDM2 | ENST00000448732.1 | 208 | − 27 (GCC)3 | |
SCN3B | ENST00000299333.7 | 201 | − 29 (GGT)3 | |
SERPINB9 | ENST00000380698.4 | 201 | − 12 (GCA)3 | |
SIGLEC7 | ENST00000305628.7 | 201 | − 80 (TTC)3 | |
SPATC1L (C21orf56) | ENST00000330205.10 | 202 | − 37 (TGG)4 | −90 (TGG)4 |
STUB1 | ENST00000219548.8 | 201 | − 91 (GCC)3 | |
SUMF1 | ENST00000272902.9 | 201 | − 102 (AGC)3 | |
TEX12 | ENST00000280358.4 | 201 | − 105 (TGG)3 | |
TMEM99 | ENST00000301665.7 | 201 | − 32 (CCG)3 | − 47 (CCG)3 |
− 59 (CCG)3 | − 83 (CCG)3 | |||
− 110 (CCG)3 | − 125 (CCG)3 | |||
− 48 (GCC)3 | − 60 (GCC)3 | |||
− 84 (GCC)3 | − 126 (GCC)3 | |||
TNNC2 | ENST00000372557.1 | 202 | − 53 (GCC)3 | |
TPTE | ENST00000427445.6 | 201 | − 110 (GCG)3 | |
TRBJ2-7 | ENST00000390419.1 | 201 | − 120 (GGC)3 | |
TRGV5 | NC_000007.14:TRGV5:u_t_1.1 | − 48 (CTC)3 | ||
TRIM39 | ENST00000376656.8 | 201 | − 58 (CCT)4 | |
UAP1 | ENST00000367926.8 | 204 | − 9 (CGT)3 | |
VNN2 | ENST00000326499.10 | 201 | − 31 (GAA)10 | |
WRN | NM_000553.4.1 | − 67 (GCC)3 − 69 (CCG)4 | − 92 (GCC)3 | |
WRNIP1 | ENST00000618555.4 | 205 | − 67 (CCG)3 | |
ZDHHC21 | XM_006716760.1.1 | − 32 (AGG)3 | ||
ZSCAN30 | ENST00000639929.1 | 212 | − 57 (GAA)3 | |