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Table 2 TPR, FPR, and FDR in variable selection with 50 replications (exponential distribution)

From: Bayesian variable selection for parametric survival model with applications to cancer omics data

Method

Scenario 1 (p = 1000)

Scenario 2 (p = 5000)

TPR

FPR

FDR

TPR

FPR

FDR

LASSO.se

0.657

1.25E−03

0.239

0.327

1.36E−04

0.258

LASSO.min

0.920

2.11E−02

0.792

0.713

4.60E−03

0.843

EBIC (τ = 0)

0.743

1.19E−03

0.209

0.703

5.78E−03

0.872

EBIC (τ = 0.5)

0.730

7.85E−04

0.151

0.480

1.48E−04

0.204

EBIC (τ = 1.0)

0.710

6.24E−04

0.127

0.377

2.00E−05

0.042

  1. Abbreviations: TPR, true positive rate; FPR, false positive rate; FDR, false discovery rate
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Human Genomics

ISSN: 1479-7364