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Table 3 Results from a gene-based SNP set and multi-trait analysis

From: Multiple genotype–phenotype association study reveals intronic variant pair on SIDT2 associated with metabolic syndrome in a Korean population

Gene The number of SNP Chromosome Position (hg19) Maximum r2 P value
(a Bonferroni-adjusted P value of discovery stage P = 3.45 × 10−6)
Discovery Replication Meta P value
PAFAH1B2 rs12420127 11 117,035,319 0.466 4.00E-07 3.99E-03 3.39E-08
rs10790175 117,034,729
rs10892082 117,039,325
SIDT2 rs2269399 11 117,066,353 0.456 2.31E-07 3.83E-03 1.93E-08
rs1242229 117,062,370
rs1784042 117,065,476
rs7107152 117,056,080
CUX2 rs7952972 12 111,646,519 0.561 3.28E-10 6.34E-02 5.32E-10
rs886126 111,679,214
rs7300082 111,737,115
rs4766553 111,634,281
rs1265566 111,716,376
rs9783423 111,639,456
rs7398833 111,786,892
rs16941414 111,779,792
rs6489979 111,614,736
rs16941284 111,610,723
rs16941319 111,646,853
rs11065851 111,723,739
rs756825 111,598,202
rs7300860 111,754,597