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Table 2 The 1st percentile of human protein-coding genes which contain human-specific STRs (length-wise) in their TIS-flanking cDNA sequence

From: Link between short tandem repeats and translation initiation site selection

Gene symbol

Gene Ensembl ID

Transcript ID

STR

GO term

KCTD19

ENSG00000168676

ENST00000566295

(A)20

Protein homooligomerization

ATP8B1

ENSG00000081923

ENST00000585322

(A)17

Magnesium ion binding

C1QTNF1

ENSG00000173918

ENST00000583904

Collagen trimer

SEC11A

ENSG00000140612

ENST00000558196

Peptidase activity

SHQ1

ENSG00000144736

ENST00000463369

SPRY1

ENSG00000164056

ENST00000505319

Multicellular organism development

ENST00000610581

 

DDX20

ENSG00000064703

ENST00000475700

(A)16

ATP binding

NAB1

ENSG00000138386

ENST00000409641

(T)16

Negative regulation of transcription

SGIP1

ENSG00000118473

ENST00000435165

(A)16

SOX6

ENSG00000110693

ENST00000528252

(A)14

Multicellular organism development

DPP6

ENSG00000130226

ENST00000406326

(T)13

Proteolysis

ENST00000377770

 

MLF1

ENSG00000178053

ENST00000482628

(G)13

SHC4

ENSG00000185634

ENST00000558220

(T)13

Stem cell differentiation

ITGB1BP2

ENSG00000147166

ENST00000538820

(T)12

Calcium ion binding

NELL2

ENSG00000184613

ENST00000548531

Calcium ion binding

GIPC1

ENSG00000123159

ENST00000393028

(GCG)11

ENST00000345425

 

ENST00000587210

 

HBS1L

ENSG00000112339

ENST00000527578

(T)11

GTPase activity

HOPX

ENSG00000171476

ENST00000556376

(A)11

Cell differentiation

OR7D2

ENSG00000188000

ENST00000642043

(T)11

G protein-coupled receptor activity

RNF145

ENSG00000145860

ENST00000520638

Integral component of membrane

TXNL4A

ENSG00000141759

ENST00000592837

mRNA splicing, via spliceosome

ABCF1

ENSG00000204574

ENST00000468958

(A)10

ATP binding

ARHGEF18

ENSG00000104880

ENST00000359920

(T)10

Rho guanyl-nucleotide exchange factor activity

ARL14

ENSG00000179674

ENST00000320767

(A)10

GTP binding

ASNS

ENSG00000070669

ENST00000448127

(T)10

Asparagine biosynthetic process

EIF2S1

ENSG00000134001

ENST00000466499

Translation initiation factor activity