Table 12 Results for GPC6, rs9524260. Corrected P values using the Benjimini-Hochberg (PBH) and Bonferroni (PBon) methods are presented below the uncorrected P value
| Â | GPC6 | rs9524260 | |||||||
|---|---|---|---|---|---|---|---|---|---|
Polymorphism | Genotypes | Â | Alleles | ||||||
Group | GG (%) | GA (%) | AA (%) | P (PBH, PBon) | HWE | G (%) | A (%) | P | OR (95% CI) |
MS total cases (n= 197) | 76 (38.6) | 90 (45.7) | 31 (15.7) | 0.236 (0.472, 1) | 0.613 | 242 (61.4) | 152 (38.6) | 0.974 | 1.00 |
PP case (n= 53) | 22 (41.5) | 21 (39.6) | 10 (18.9) | 0.146 | Â | 65 (61.3) | 41 (38.7) | 0.967 | 1.01 |
SP case (n= 50) | 16 (32.0) | 24 (48.0) | 10 (20.0) | 0.296 | Â | 56 (56.0) | 44 (44.0) | 0.316 | 1.26 |
RR case (n= 94) | 38 (40.4) | 45 (47.9) | 11 (11.7) | 0.607 | Â | 121 (64.4) | 67 (35.6) | 0.516 | 0.89 |
Control (n= 182) | 63 (34.6) | 98 (53.8) | 21 (11.6) | Â | 0.064 | 224 (61.5) | 140 (38.5) | Â | Â |
HapMap CEU (%) | 36.3 | 54.9 | 8.8 | Â | Â | 63.7 | 36.3 | Â | Â |