|  | Genotype (%) | Allele (%) | Current study | GWAS significance | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene | SNP | Hom (%) | Het (%) | Var (%) | Allele 1 | Allele 2 | P value | Corrected B-H | Corrected Bonferroni | Cenit 2009 Pun (PC) | Baranzini 2009 Adj Log p value | Lorentzen 2010 Pun |
GPC5 | rs7333912 | 95.1 | 4.9 | 0 | 97.6 | 2.4 | 0.76 | 0.878 | 1 | Â | Â | 0.02 |
GPC5 | rs10492503 | 32.8 | 48.1 | 19.1 | 56.8 | 43.2 | 0.016 | 0.08 | 0.128 | 0.016 (0.096) | Â | Â |
GPC5 | rs9523787 | 71.2 | 26.3 | 2.5 | 84.4 | 15.6 | 0.069 | 0.812 | 1 | Â | Â | 0.0002 |
GPC5 | rs9523762 | Did not follow Hardy-Weinburg equilibrium | Â | 5.155 | Â | |||||||
GPC6 | rs17267815 | 22.4 | 51.2 | 26.4 | 48.1 | 51.9 | 0.0797 | 0.213 | 0.638 | Â | Â | 0.03 |
GPC6 | rs9524260 | 38.6 | 45.7 | 15.7 | 61.4 | 38.6 | 0.236 | 0.472 | 1 | Â | Â | 0.10 |