From: Identification of rare and common variants in BNIP3L: a schizophrenia susceptibility gene
SNP ID | Group | Allele frequency | Allelic P | Corrected Pa | OR | 95% CI | Genotype frequency | Genotypic P | Corrected Pa | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|
rs1055476 | Â | G | C | Â | Â | Â | Â | C/C | C/G | Â | Â | Â |
chr8:26383121 | SCZ | 35 (0.009) | 3577 (0.990) | 0.004** | 0.179 | 3.245 | [1.362~7.728] | 1771 (0.980) | 35 (0.019) | Â | 0.004** | 0.174 |
 | Control | 6 (0.003) | 1990 (0.996) |  |  |  |  | 992 (0.993) | 6 (0.006) |  |  |  |
rs147389989 | Â | - | TCTT | Â | Â | Â | Â | TCTT/TCTT | TCTT/- | -/- | Â | Â |
chr8:26411153 | SCZ | 106 (0.029) | 3506 (0.970) | 6.52e−05** | 0.007** | 2.383 | [1.536~3.698] | 1701 (0.941) | 104 (0.057) | 1 (5.54e−04) | 3.22e-04** | 0.017* |
 | Control | 25 (0.012) | 1971 (0.987) |  |  |  |  | 973 (0.974) | 25 (0.025) |  |  |  |
rs17310286 | Â | T | C | Â | Â | Â | Â | C/C | T/C | T/T | Â | Â |
chr8:26411516 | SCZ | 1462 (0.404) | 2150 (0.595) | 0.012* | 0.266 | 1.154 | [1.031~1.291] | 636 (0.352) | 878 (0.486) | 292 (0.161) | 0.028* | 0.452 |
 | Control | 740 (0.370) | 1256 (0.629) |  |  |  |  | 385 (0.385) | 486 (0.486) | 127 (0.127) |  |  |
rs17055200 | Â | A | G | Â | Â | Â | Â | G/G | G/A | A/A | Â | Â |
chr8:26411573 | SCZ | 134 (0.037) | 3478 (0.962) | 0.576 | Â | 0.922 | [0.695~1.223] | 1673 (0.926) | 132 (0.073) | 1 (5.54e-04) | 0.604 | Â |
 | Control | 80 (0.040) | 1916 (0.959) |  |  |  |  | 918 (0.919) | 80 (0.080) |  |  |  |
rs1042992 | Â | T | C | Â | Â | Â | Â | C/C | T/C | T/T | Â | Â |
chr8:26411675 | SCZ | 1435 (0.397) | 2177 (0.602) | 0.581 | Â | 1.031 | [0.922~1.154] | 662 (0.366) | 853 (0.472) | 291 (0.161) | 0.385 | Â |
 | Control | 778 (0.389) | 1218 (0.610) |  |  |  |  | 363 (0.363) | 492 (0.492) | 143 (0.143) |  |  |
rs10503786 | Â | T | C | Â | Â | Â | Â | C/C | C/T | T/T | Â | Â |
chr8:26412420 | SCZ | 656 (0.181) | 2956 (0.818) | 0.833 | Â | 1.015 | [0.880~1.170] | 1215 (0.672) | 526 (0.291) | 65 (0.035) | 0.674 | Â |
 | Control | 358 (0.179) | 1638 (0.820) |  |  |  |  | 670 (0.671) | 298 (0.298) | 30 (0.030) |  |  |