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Table 4 Haplotype analysis for association of TNFAIP3 gene polymorphisms with scleritis

From: The haplotypes of various TNF related genes associated with scleritis in Chinese Han

 

Haplotypea

Cases (%)

Controls (%)

χ2

P value

Pc value

OR (95% CI)

Scleritis

CGG

57.95 (0.052)

52.81 (0.037)

3.922

0.048

NS

1.467 (1.002~2.149)

TAT

93.33 (0.085)

95.70 (0.066)

3.168

0.075

NS

1.390 (0.972~1.761)

TGT

926.62 (0.839)

1268.28 (0.878)

7.307

0.007

0.021

0.717 (0.563~0.913)

Scleritis subgroups

 Anterior scleritis

TGT

593.56 (0.841)

1268.28 (0.878)

5.103

0.024

NS

0.729 (0.554~0.960)

 Posterior scleritis

TGT

229.34 (0.837)

1268.28 (0.878)

3.531

0.060

NS

0.695 (0.475~1.017)

 Pan-scleritis

TGT

53.00 (0.828)

1268.28 (0.878)

1.518

0.218

NS

0.659 (0.338~1.285)

 Scleritis without systemic disease

TGT

835.12 (0.840)

1268.28 (0.878)

7.072

0.008

0.024

0.715 (0.558~0.916)

 Scleritis with systemic disease

TGT

92.00 (0.836)

1268.28 (0.878)

1.777

0.183

NS

0.699 (0.412~1.187)

  1. Order of SNPs for haplotype analysis is rs9494885, rs3799491, and rs2230926. TNFAIP3 tumor necrosis factor alpha-induced protein 3, Pc value P value with Bonferroni correction, NS not significant. Italicized values are statistically significant
  2. aHaplotypes with a frequency less than 3% were not included in the analysis