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Table 6 Haplotype analysis for association of TNFSF15 gene polymorphisms with scleritis

From: The haplotypes of various TNF related genes associated with scleritis in Chinese Han

 

Haplotypea

Cases (%)

Controls (%)

χ2

P value

Pc value

OR (95% CI)

Scleritis

CCC

71.22 (0.080)

61.93 (0.051)

8.122

0.004

0.012

1.662 (1.168~2.363)

CCT

126.33 (0.143)

187.89 (0.154)

0.342

0.559

NS

0.930 (0.728~1.187)

CTC

417.41 (0.471)

573.14 (0.470)

0.148

0.701

NS

1.035 (0.869~1.232)

CTT

37.05 (0.042)

58.03 (0.048)

0.308

0.579

NS

0.888 (0.582~1.353)

TCC

217.94 (0.246)

335.10 (0.275)

1.63

0.202

NS

0.879 (0.721~1.072)

Scleritis subgroups

 Anterior scleritis

CCC

51.62 (0.089)

61.93 (0.051)

10.319

0.001

0.003

1.860 (1.267~2.730)

 Posterior scleritis

CCC

13.82 (0.065)

61.93 (0.051)

0.87

0.351

NS

1.331 (0.729~2.432)

 Pan-scleritis

CCC

–

–

–

–

–

–

 Scleritis without systemic disease

CCC

61.54 (0.077)

61.93 (0.051)

6.113

0.013

0.039

1.579 (1.096~2.274)

 Scleritis with systemic disease

CCC

9.98 (0.116)

61.93 (0.051)

6.832

0.009

0.027

2.496 (1.229~5.067)

  1. Order of SNPs for haplotype analysis is rs6478106, rs3810936, and rs7865494. TNFSF15 tumor necrosis factor ligand superfamily member 15, Pc value P value with Bonferroni correction, NS not significant. Italicized values are statistically significant
  2. aHaplotypes with a frequency less than 3% were not included in the analysis