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Table 1 Top 15 upregulated and downregulated gene in arthritic samples from patients with and without osteoarthritis ranked by logFC after GEO2R analysis

From: Cathelicidin antimicrobial peptide (CAMP) gene promoter methylation induces chondrocyte apoptosis

GENE_SYMBOL

Adj. p value

logFC

Up/Down

CRB1

1.52E–04

1.01580843

Up

ZSCAN12

1.89E–03

1.0271285

Up

LEO1

1.21E–04

1.03342688

Up

ESR1

4.03E–04

1.04997982

Up

FAM20A

2.36E–03

1.05411929

Up

ZNF354B

2.06E–04

1.05630409

Up

CCR10

1.15E–03

1.06099425

Up

INCENP

1.21E–04

1.18121011

Up

CAMP

3.24E–03

1.23685287

Up

THAP5

1.31E–05

1.27811954

Up

SMNDC1

8.17E–04

1.29092563

Up

HOXC8

9.69E–05

1.30931826

Up

LCE2B

3.73E–04

1.34166775

Up

FAM90A1

2.87E–03

1.40391379

Up

QRFPR

4.59E–04

1.57552192

Up

SLC38A6

1.41E–03

− 1.64465134

Down

PCDHB10

6.24E–04

− 1.43430506

Down

HLA-DRB4

1.21E–04

− 1.4061153

Down

TOLLIP

8.09E–04

− 1.31133046

Down

HLA-DQA2

9.20E–04

− 1.29212829

Down

TP53TG3D

1.99E–03

− 1.25442713

Down

CHST1

2.18E–03

− 1.1748763

Down

ANO8

2.34E–03

− 1.16784996

Down

TRIM78P

2.18E–03

− 1.10578964

Down

ADHFE1

1.66E–03

− 1.07972333

Down

DUT

3.48E–03

− 1.07647613

Down

SS18L1

2.18E–03

− 1.07511907

Down

FRMD8

1.72E–04

− 1.06645789

Down

FAM184B

2.18E–03

− 1.06047291

Down

TMEM259

9.41E–04

− 1.05326043

Down

  1. FC, fold change