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Table 1 High-impact variants identified in the G6PD gene

From: Seven novel glucose-6-phosphate dehydrogenase (G6PD) deficiency variants identified in the Qatari population

Position

rs ID

Variant name

CDS substitution

Amino acid substitution

Exon

CADD score

HGMD

Frequency in QGP

Frequency in GME

Frequency in gnomAD

† 153760419

  

c.1441C > G

p.Pro481Ala

12

7.925

 

0.00008268

0.00139

 

153760605

rs398123546

G6PD Union

c.1360C > T

p.Arg454Cys

11

34

DM

0.00008269

 

0.0001071

‡153760654

rs2230037

c.1311C > T

p.Tyr437Tyr

11

6.988

DM?

0.284687

 

0.169

153760953

rs2230036

c.1116G > A

p.Gln372Gln

10

4.741

0.00529188

0.00691

0.009705

† 153761006

  

c.1063A > G

p.Ile355Val

10

6.273

 

0.00041342

  

153761012

rs137852333

G6PD Ierapetra

c.1057C > T

p.Pro353Ser

10

24.8

DM

0.00033074

  

153761205

rs5030869

G6PD Chatham

c.1003G > A

p.Ala335Thr

9

27.3

DM

0.00504382

0.00207

0.0002306

153762312

rs782118135

c.708C > T

p.Thr236Thr

7

8.209

0.00024805

 

0.00001647

153762330

rs781917123

c.690C > T

p.Ile230Ile

7

13.01

0.00016537

 

0.0007578

153762564

rs781866029

c.633C > T

p.Leu211Leu

6

10.35

0.00008268

 

153762600

rs369516039

c.597C > T

p.Ile199 Ile

6

10.89

0.00008268

  

153762693

rs782678149

c.504C > T

p.Ile168 Ile

6

12.96

0.00016537

 

0.00001647

153763391

rs370918918

 

c.477G > C

p.Met159Ile

5

18.24

DM?

0.00223251

 

0.001219

153763391

rs370918918

 

c.477G > A

p.Met159Ile

5

20.2

 

0.00016537

  

153763464

rs782322505

 

c.404A > C

p.Asn135Thr

5

24.5

DM

0.00033074

 

0.000008237

† 153763512

  

c.356A > C

p.Gln119Pro

5

2.238

 

0.00008268

  

† 153763556

 

c.312C > T

p.Arg104Arg

5

2.941

0.00016537

  

153764155

rs781794862

 

c.264C > G

p.Phe88Leu

4

2.678

 

0.00008268

 

0.0001565

153764210

rs782090947

 

c.209A > G

p.Tyr70Cys

4

22.9

DM

0.00016537

 

0.000008237

153764217

rs1050828

G6PD Asahi

c.202G > A

p.Val68Met

4

27.2

DM

0.00785513

0.00275

0.009974

  1. Novel variants are denoted with a dagger (†). Variants are described in relation to NM_001042351.3; those denoted with (‡) are described in relation to NM_001042351.1. CDS: coding sequence