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Table 3 3p21 haplotype frequencies in 11 population samples

From: Haplotype structure and linkage disequilibrium in chemokine and chemokine receptor genes

No.

Haplotype

Mende

Temne

Afr-Amer

Euro-Amer

Hispanic

Mixteca

Mixe

Zapotec

Chinese

Indonesian

PNG

Global

1

11111111111111

0.143

0.100

0.134

0.294

0.308

0.245

0.391

0.422

0.062

0.415

0.546

0.279

5

11211211111111

0.029

0.056

0.085

0.089

0.187

0.255

0.351

0.254

0.158

0.053

0.100

0.147

3

11112122221111

0.059

0.033

0.062

0.175

0.204

0.282

0.162

0.189

 

0.021

 

0.108

9

11121121211111

0.273

0.283

0.174

  

0.027

     

0.069

2

11111112221111

  

0.029

0.173

0.109

0.027

0.014

0.01 1

0.165

0.158

0.035

0.066

10

12111112211112

0.274

0.293

0.127

        

0.063

 

11111122221111

  

0.006

  

0.064

0.027

0.022

0.288

0.163

0.094

0.061

 

11112111111111

        

0.169

0.033

0.133

0.031

4

21111121211121

  

0.007

0.078

 

0.091

 

0.044

0.038

0.013

 

0.025

6

11111111111211

 

0.006

0.024

0.105

0.028

      

0.015

7

11112121111111

   

0.023

0.046

 

0.055

    

0.011

 

21121121211111

0.028

0.075

         

0.009

 

11212211111111

        

0.034

 

0.065

0.009

 

11112112221111

  

0.007

     

0.066

 

0.026

0.009

 

21211211111111

0.030

0.027

0.022

    

0.012

   

0.008

 

11111112211111

0.032

0.011

       

0.041

 

0.008

 

11211111111111

0.040

0.012

0.026

        

0.007

 

11111121111111

  

0.065

        

0.006

 

11111121211121

    

0.042

0.009

   

0.013

 

0.006

 

11111122211111

  

0.005

      

0.053

 

0.005

 

11121111211111

  

0.055

        

0.005

 

21111111111111

0.034

 

0.008

        

0.004

 

12111122211112

  

0.036

        

0.003

8

11111111112111

   

0.022

       

0.002

A

11111121211111

   

0.004

       

0.000

 

Heterozygosity

0.82 ±0.016

0.81 ± 0.018

0.92 ± 0.008

0.83 ± 0.012

0.82 ± 0.034

0.79 ±0.017

0.70 ± 0.028

0.73 ±0.03

0.84 ± 0.026

0.76 ± 0.04

0.66 ± 0.047

 
  1. Haplotype diversity values are indicated at the bottom of the table. Haplotype numbers describe haplotypes defined in Clark et al. [43].
  2. Only estimated haplotypes above 3 per cent frequency in any population are listed. The ancestral haplotype is denoted by the box.
  3. Abbreviations: Afr-Amer = African-Americans; Euro-Amer = European-Americans; PNG = Papua New Guineans.