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Table 2 Population-descriptive parameters grouped by continental region.

From: Geographic stratification of linkage disequilibrium: a worldwide population study in a region of chromosome 22

Continental region

Population

aN

bDh

cKh

dKmax

eFNF

fKh shared

g% shared

hS fixed

i% fixed

Sub-Saharan Africa:

          
 

Bantu (BAN)

40

0.9628 ± 0.0144

24

34

0.31

11

45.83

-

-

 

Mandenka (MAN)

48

0.9344 ± 0.0247

26

39

0.35

11

42.31

-

-

 

Yoruba (YOR)

50

0. 8555 ± 0.0491

27

40

0.34

11

40.74

-

-

 

San (SAN)

14

0.8681 ± 0.0594

7

12

0. 50

5

71.43

5

41.67

 

Mbuti Pygmies (MBU)

28

0.9524 ± 0.0242

18

24

0.27

8

44.44

1

8.33

 

Biaka Pygmies (BIA)

72

0. 8 975 ± 0.0242

26

44

0.43

18

69.23

-

-

 

Average

42

0.9117

21

32

0.36

11

52.33

  

Europe:

          
 

Orcadian (ORC)

32

0.9355 ± 0.0240

17

31

0. 48

15

88.24

-

-

 

English (ENG)j

140

0.9581 ± 0.0071

51

117

0.57

41

80.39

-

-

 

Adygei (ADY)

34

0.9340 ± 0.0264

19

33

0.45

13

68.42

-

-

 

Russian (RUS)

50

0.9567 ± 0.0178

31

48

0.37

18

58.06

-

-

 

French Basque (FRB)

48

0.9371 ± 0.0215

24

46

0. 50

19

79.17

-

-

 

French (FRE)

58

0.9383 ± 0.0222

33

56

0. 43

22

66.67

-

-

 

Catalan (CAT)

94

0.9526 ± 0.0114

41

87

0. 54

31

75.61

-

-

 

Continental Italian (CIT)

44

0.9440 ± 0.0177

22

43

0. 51

14

63.64

-

-

 

Sardinian (SAR)

56

0.9325 ± 0.0186

26

54

0.54

19

73.08

-

-

 

Average

62

0.9432

29

57

0. 51

21

72.59

  

Middle East/North Africa:

          
 

Mozabite (MOZ)

60

0.9384 ± 0.0183

28

54

0.50

16

57.14

 

-

 

Bedouin (BED)

98

0.9552 ± 0.0115

46

92

0. 51

33

71.74

 

-

 

Druze (DRU)

96

0.9575 ± 0.0090

41

90

0. 56

31

75.61

 

-

 

Palestinian (PAL)

102

0.9639 ± 0.0081

48

96

0.51

27

56.25

 

-

 

Average

89

0.9537

41

83

0. 52

27

65.19

  

Central/South Asia:

          
 

Balochi (BAL)

50

0.9706 ± 0.0093

28

48

0.43

21

75.00

-

-

 

Brahui (BRA)

50

0.9314 ± 0.0262

28

48

0.43

13

46.43

-

-

 

Makrani (MAK)

50

0.9551 ± 0.0165

30

48

0.39

17

56.67

-

-

 

Sindhi (SIN)

50

0.9649 ± 0.0134

30

49

0. 40

19

63.33

-

-

 

Pathan (PAT)

50

0.9429 ± 0.0233

30

48

0.39

18

60.00

-

-

 

Burusho (BUR)

50

0.9535 ± 0.0137

25

47

0. 49

18

72.00

-

-

 

Hazara (HAZ)

50

0.9527 ± 0.0153

26

45

0.44

15

57.69

-

-

 

Kalash (KAL)

50

0.9143 ± 0.0246

21

47

0. 58

18

85.71

-

-

 

Average

50

0.948

27

48

0.45

17

64.60

  

East Asia:

          
 

Han (HAN)

90

0.9348 ± 0.0135

34

71

0.54

23

67.65

1

8.33

 

North China (NCH)

138

0.9305 ± 0.0144

52

109

0.53

33

63.46

-

-

 

South China (SCH)

140

0.9298 ± 0.0146

48

103

0.54

30

62.50

1

8.33

 

Cambodian (CAM)

22

0.9221 ± 0.0381

13

20

0.39

11

84.62

2

16.67

 

Japanese (JAP)

62

0. 8 911 ± 0.0328

31

49

0.38

20

64.52

1

8.33

 

Yakut (YAK)

48

0.9273 ± 0.0254

27

39

0.32

22

81.48

-

-

 

Average

83

0.9225

34

65

0.49

23

70.70

  

Oceania:

          
 

Non-Austronesian (NAN) Melanesian

44

0.6332 ± 0.0581

5

12

0.70

5

100.00

6

50.00

 

Papuan (PAP)

34

0.8111 ± 0.0454

10

12

0.20

7

70.00

3

25.00

 

Average

39

0.7167

8

12

0.45

6

85.00

  

America:

          
 

Karitiana (KAR)

48

0.7881 ± 0.0369

7

19

0.71

6

85.71

6

50.00

 

Suruí (SUR)

42

0.7573 ± 0.0333

6

15

0.69

6

100.00

7

58.33

 

Colombian (COL)

26

0. 8 246 ± 0.0475

7

15

0.62

6

85.71

4

33.33

 

Maya (MAY)

50

0.7967 ± 0.0565

20

26

0.25

17

85.00

-

-

 

Pima (PIM)

50

0. 8 204 ± 0.0335

12

16

0.29

10

83.33

5

41.67

 

Average

43

0.797

10

18.2

0.48

9

87.95

  
  1. a N, number of chromosomes
  2. b Dh, haplotype diversity
  3. c Kh, observed number of haplotypes
  4. d Kmax, number of haplotypes expected under equilibrium
  5. e FNF, fraction of haplotypes not found for each population defined (see Methods)
  6. f Kh shared, number of haplotypes shared between two or more populations
  7. g% shared, percentage of shared haplotypes
  8. hS fixed, number of non-polymorphic single nucleotide polymorphisms (SNPs)
  9. i % fixed, percentage of non-polymorphic SNPs
  10. j ENG, English reference sample [8].