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Table 2 Population-descriptive parameters grouped by continental region.

From: Geographic stratification of linkage disequilibrium: a worldwide population study in a region of chromosome 22

Continental region Population aN bDh cKh dKmax eFNF fKh shared g% shared hS fixed i% fixed
Sub-Saharan Africa:           
  Bantu (BAN) 40 0.9628 ± 0.0144 24 34 0.31 11 45.83 - -
  Mandenka (MAN) 48 0.9344 ± 0.0247 26 39 0.35 11 42.31 - -
  Yoruba (YOR) 50 0. 8555 ± 0.0491 27 40 0.34 11 40.74 - -
  San (SAN) 14 0.8681 ± 0.0594 7 12 0. 50 5 71.43 5 41.67
  Mbuti Pygmies (MBU) 28 0.9524 ± 0.0242 18 24 0.27 8 44.44 1 8.33
  Biaka Pygmies (BIA) 72 0. 8 975 ± 0.0242 26 44 0.43 18 69.23 - -
  Average 42 0.9117 21 32 0.36 11 52.33   
Europe:           
  Orcadian (ORC) 32 0.9355 ± 0.0240 17 31 0. 48 15 88.24 - -
  English (ENG)j 140 0.9581 ± 0.0071 51 117 0.57 41 80.39 - -
  Adygei (ADY) 34 0.9340 ± 0.0264 19 33 0.45 13 68.42 - -
  Russian (RUS) 50 0.9567 ± 0.0178 31 48 0.37 18 58.06 - -
  French Basque (FRB) 48 0.9371 ± 0.0215 24 46 0. 50 19 79.17 - -
  French (FRE) 58 0.9383 ± 0.0222 33 56 0. 43 22 66.67 - -
  Catalan (CAT) 94 0.9526 ± 0.0114 41 87 0. 54 31 75.61 - -
  Continental Italian (CIT) 44 0.9440 ± 0.0177 22 43 0. 51 14 63.64 - -
  Sardinian (SAR) 56 0.9325 ± 0.0186 26 54 0.54 19 73.08 - -
  Average 62 0.9432 29 57 0. 51 21 72.59   
Middle East/North Africa:           
  Mozabite (MOZ) 60 0.9384 ± 0.0183 28 54 0.50 16 57.14   -
  Bedouin (BED) 98 0.9552 ± 0.0115 46 92 0. 51 33 71.74   -
  Druze (DRU) 96 0.9575 ± 0.0090 41 90 0. 56 31 75.61   -
  Palestinian (PAL) 102 0.9639 ± 0.0081 48 96 0.51 27 56.25   -
  Average 89 0.9537 41 83 0. 52 27 65.19   
Central/South Asia:           
  Balochi (BAL) 50 0.9706 ± 0.0093 28 48 0.43 21 75.00 - -
  Brahui (BRA) 50 0.9314 ± 0.0262 28 48 0.43 13 46.43 - -
  Makrani (MAK) 50 0.9551 ± 0.0165 30 48 0.39 17 56.67 - -
  Sindhi (SIN) 50 0.9649 ± 0.0134 30 49 0. 40 19 63.33 - -
  Pathan (PAT) 50 0.9429 ± 0.0233 30 48 0.39 18 60.00 - -
  Burusho (BUR) 50 0.9535 ± 0.0137 25 47 0. 49 18 72.00 - -
  Hazara (HAZ) 50 0.9527 ± 0.0153 26 45 0.44 15 57.69 - -
  Kalash (KAL) 50 0.9143 ± 0.0246 21 47 0. 58 18 85.71 - -
  Average 50 0.948 27 48 0.45 17 64.60   
East Asia:           
  Han (HAN) 90 0.9348 ± 0.0135 34 71 0.54 23 67.65 1 8.33
  North China (NCH) 138 0.9305 ± 0.0144 52 109 0.53 33 63.46 - -
  South China (SCH) 140 0.9298 ± 0.0146 48 103 0.54 30 62.50 1 8.33
  Cambodian (CAM) 22 0.9221 ± 0.0381 13 20 0.39 11 84.62 2 16.67
  Japanese (JAP) 62 0. 8 911 ± 0.0328 31 49 0.38 20 64.52 1 8.33
  Yakut (YAK) 48 0.9273 ± 0.0254 27 39 0.32 22 81.48 - -
  Average 83 0.9225 34 65 0.49 23 70.70   
Oceania:           
  Non-Austronesian (NAN) Melanesian 44 0.6332 ± 0.0581 5 12 0.70 5 100.00 6 50.00
  Papuan (PAP) 34 0.8111 ± 0.0454 10 12 0.20 7 70.00 3 25.00
  Average 39 0.7167 8 12 0.45 6 85.00   
America:           
  Karitiana (KAR) 48 0.7881 ± 0.0369 7 19 0.71 6 85.71 6 50.00
  Suruí (SUR) 42 0.7573 ± 0.0333 6 15 0.69 6 100.00 7 58.33
  Colombian (COL) 26 0. 8 246 ± 0.0475 7 15 0.62 6 85.71 4 33.33
  Maya (MAY) 50 0.7967 ± 0.0565 20 26 0.25 17 85.00 - -
  Pima (PIM) 50 0. 8 204 ± 0.0335 12 16 0.29 10 83.33 5 41.67
  Average 43 0.797 10 18.2 0.48 9 87.95   
  1. a N, number of chromosomes
  2. b Dh, haplotype diversity
  3. c Kh, observed number of haplotypes
  4. d Kmax, number of haplotypes expected under equilibrium
  5. e FNF, fraction of haplotypes not found for each population defined (see Methods)
  6. f Kh shared, number of haplotypes shared between two or more populations
  7. g% shared, percentage of shared haplotypes
  8. hS fixed, number of non-polymorphic single nucleotide polymorphisms (SNPs)
  9. i % fixed, percentage of non-polymorphic SNPs
  10. j ENG, English reference sample [8].