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Table 1 Cosmopolitan linkage disequilibrium maps at different kilobase marker densities

From: Cosmopolitan linkage disequilibrium maps

Density

N

m

ε

M

Lp

-2lnL

df

VLDU

No. LDUs

No. holes

6

132,171

1,691

1.1521

0.894

0.091

179,822

130,480

1.378

187.15

2

8

76,236

1,289

1.1609

0.877

0.092

105,937

74,947

1.413

198.02

5

10

45,221

992

1.1399

0.895

0.090

61,091

44,229

1.381

204.41

5

12

31,497

833

1.1331

0.897

0.091

40,581

30,664

1.323

204.56

6

15

20,483

670

1.1381

0.870

0.090

28,439

19,813

1.435

196.28

7

  1. N: Number of pairs; m: number of loci; ε, M; Lp: Malecot parameters; -2lnL: composite -2 log likelihood; df: degrees of freedom; VLDU: residual error variance for the linkage disequilibrium unit map.
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Human Genomics

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