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Table 5 Summary of the gene-specific information (retrieved from Entrez Gene, an NCBI’s database for gene-specific information)

From: Gene selection and cancer type classification of diffuse large-B-cell lymphoma using a bivariate mixture model for two-species data

Entrez Gene ID

Category

Dog ortholog

Frequencya

Symbol

Official full name

953

1

486810

156

CD39; ATPDase;

Ectonucleoside triphosphate

    

FLJ40921; FLJ40959;

diphosphohydrolase 1

    

NTPDase-1; DKFZp686D194; DKFZp686I093; ENTPD1

 

1278

2

403824

156

OI4; COL1A2

Collagen, type I, alpha 2

2530

1

448804

156

MGC26465; FUT8

Fucosyltransferase 8 (alpha (1,6) fucosyltransferase)

4005

2

609006

156

TTG2; RBTN2; RHOM2;

LIM domain only 2 (rhombotin-like 1)

    

RBTNL1; LMO2

 

4033

3

486631

156

JAW1; LRMP

Lymphoid-restricted membrane protein

5919

2

475532

156

TIG2; HP10433; RARRES2

Retinoic acid receptor responder (tazarotene induced) 2

6003

3

612789

124

MGC17173; RGS13

Regulator of G-protein signaling 13

6856

3

475889

154

SYPL; H-SP1; SYPL1

Synaptophysin-like 1

6925

1

403949

156

E2-2; ITF2; PTHS; SEF2;

Transcription factor 4

    

SEF2-1; SEF2-1A; SEF2-1B;

 
    

bHLHb19; MGC149723;

 
    

MGC149724; TCF4

 

7037

1

403703

11

TFR; CD71; TFR1; TRFR;

Transferrin receptor (p90, CD71)

    

TFRC

 

9435

1

485701

156

C6ST; GST2; GST-2; Gn6ST-1; CHST2

Carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2

9760

2

486964

156

TOX1; KIAA0808; TOX

Thymocyte selection-associated high mobility group box

10447

3

612336

154

ILEI; GS3786; FAM3C

Family with sequence similarity 3, member C

23075

3

485385

4

HSPC321; SWAP-70;

SWAP switching B-cell complex 70kDa

    

FLJ39540; KIAA0640;

subunit

    

SWAP70

 

25816

1

481428

156

GG2-1; SCCS2; SCC-S2;

Tumor necrosis factor, alpha-induced

    

MDC-3.13; TNFAIP8

protein 8

27086

1

484692

156

QRF1; 12CC4; hFKH1B;

Forkhead box P1

    

HSPC215; FLJ23741;

 
    

MGC12942; MGC88572;

 
    

MGC99551; FOXP1

 

56941

2

484628

156

DC12; MGC111075;

Chromosome 3 open reading frame 37

    

C3orf37

 

81552

1

608562

145

ECOP; GASP; FLJ20532;

Vesicular, overexpressed in cancer,

    

DKFZp564K0822; VOPP1

prosurvival protein 1

81641

1

479002

116

Apm; Apn; KZP; AP-M; AP-N; Lap1; rAPN; Anpep

Alanyl (membrane) aminopeptidase

121355

4

477590

156

FAM112B; FLJ32942;

Gametocyte specific factor 1

    

GTSF1

 

219972

1

475960

156

MPG1; MGC132657;

Macrophage expressed 1

    

MGC138435; MPEG1

 
  1. For the 21 human genes in categories (1, 2, 3, and 4) determined by the bivariate mixture model.
  2. Genes in italics were identified by this search as potentially associated with the development of DLBCL.
  3. anumber of times the corresponding gene was found in the classification gene set for the 156 LOOCV instances.
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Human Genomics

ISSN: 1479-7364