Skip to main content

Table 8 Potential driver genes reported in previous studies and corresponding RCNAs detected in this study

From: Copy number alterations detected by whole-exome and whole-genome sequencing of esophageal adenocarcinoma

Genes

Cytoband

Boundary (Mb)

ARID1A

1p36.11

chr1:19.53-31.73

SKI.PRKCZ

1p36.33

chr1:0.99-3.16

MCL1

1q21.3

chr1:149.94-156.69

SCN10A

3p24.3

chr3:12.79-69.03

PRCKI

3q26.2

chr3:169.43-170.59

PDE4D

5q12.1

chr5:58.15-59.79

APC

5q14.3

chr5:79.47-130.52

EYS

6q12

chr6:64.42-71.14

MYB

6q23.3

chr6:135.29-135.71

C6orf118, SYNE1

6q27

chr6:151.79-171.12

EGFR

7p11.2

chr7:55.00-55.46

CDK6

7q21.2

chr7:91.98-92.76

MET

7q31.2

chr7:115.61-117.83

MYC

8q24.21

chr8:126.45-129.02

CDKN2A, CDKN2B

9p21.3

chr9:21.86-23.69

PTPRD

9p23

chr9:6.64-15.17

TLR4

9q31.1

chr9:70.49-123.15

ATM

11q14.1

chr11:77.96-111.96

KRAS

12p12.1

chr12:25.34-25.67

ARID2

12q12

chr12:33.56-48.13

GATA6

18q11.2

chr18:19.75-20.52

DMD

Xp21.1

chrX:30.87-32.66