Table 1 Summary of sequencing output and quality for each sample
Sample | Reads | Bases | ||||||
|---|---|---|---|---|---|---|---|---|
Total | Mapped | On target | Mean depth | Aligned | ≥Q20 | On target | Uniformitya | |
1 | 1,348,756 | 1,322,761 | 91.29 % | 203.4 | 98.59 % | 87.61 % | 55.36 % | 92.47 % |
2 | 1,389,395 | 1,361,138 | 91.29 % | 209.9 | 98.58 % | 87.80 % | 54.95 % | 92.55 % |
3 | 1,552,042 | 1,522,728 | 91.16 % | 234.3 | 98.63 % | 87.82 % | 55.29 % | 92.37 % |
4 | 1,494,165 | 1,470,215 | 91.90 % | 226.8 | 98.71 % | 87.87 % | 55.06 % | 92.76 % |
5 | 1,369,435 | 1,346,412 | 91.91 % | 210.2 | 98.78 % | 88.89 % | 54.65 % | 92.90 % |
6 | 1,663,702 | 1,633,814 | 91.20 % | 252.4 | 98.72 % | 88.33 % | 55.03 % | 92.43 % |
7 | 1,602,753 | 1,569,980 | 91.01 % | 242.7 | 98.67 % | 88.75 % | 55.14 % | 92.36 % |
8 | 1,694,348 | 1,662,379 | 91.25 % | 256.8 | 98.69 % | 88.80 % | 54.90 % | 92.36 % |
9 | 1,431,017 | 1,398,943 | 90.08 % | 211.7 | 98.30 % | 88.04 % | 54.83 % | 92.52 % |
10 | 1,717,174 | 1,677,112 | 90.16 % | 253.2 | 98.24 % | 87.83 % | 55.57 % | 92.12 % |
11 | 1,408,352 | 1,373,789 | 89.67 % | 205.5 | 98.12 % | 87.42 % | 55.28 % | 92.56 % |
12 | 1,511,078 | 1,484,377 | 90.97 % | 227.3 | 98.42 % | 88.06 % | 54.93 % | 92.51 % |
13 | 1,554,866 | 1,521,948 | 90.96 % | 235.1 | 98.44 % | 89.17 % | 55.07 % | 92.11 % |
14 | 1,578,886 | 1,547,559 | 91.48 % | 239.6 | 98.54 % | 89.31 % | 55.09 % | 92.54 % |
15 | 1,558,185 | 1,525,061 | 90.91 % | 234.0 | 98.50 % | 88.91 % | 55.03 % | 92.40 % |