Table 4 Repartition of the sequenced polymorphisms in 1000G database
From: Novel analytical methods to interpret large sequencing data from small sample sizes
Total polymorphisms | Polymorphisms with AltAF in 1000G | Percentage with AltAF | |
|---|---|---|---|
Upstream to the promoter | 6 | 3 | 50.0 |
Downstream to the promoter | 3 | 2 | 66.7 |
UTR5 | 56 | 52 | 92.9 |
UTR3 | 32 | 28 | 87.5 |
Exonic | 170 | 138 | 81.2 |
Exonic splicing | 5 | 3 | 60.0 |
Splicing | 1 | 1 | 100.0 |
Intergenic | 3 | 3 | 100.0 |
Intronic | 431 | 347 | 80.5 |
ncRNA_exonic | 1 | 1 | 100.0 |
Total | 708 | 578 | 81.6 |