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Table 1 The 20-lncRNA list identified by the iCluster ensemble

From: An ensemble of the iCluster method to analyze longitudinal lncRNA expression data for psoriasis patients

Gene symbol

Score used to evaluate the importance of a specific genea

Biological relevance (confidence score)

LINC00936

11.07

 

FAM13A-AS1

9.23

 

PSMA3-AS1

6.49

 

LINC00173

4.78

 

PCED1B-AS1

4.73

I (0.91)

SCARNA9

3.87

I (0.18)

TMEM99

3.03

I (0.02)

H19

2.89

D (0.18)

LINC00640

2.65

 

PAXIP1-AS1

2.63

 

MAPKAPK5-AS1

2.02

I (0.11)

DICER1-AS1

1.92

I (0.04)

MIR600HG

1.9

 

SNHG7

1.82

I (0.1)

ZMIZ1-AS1

1.79

I (0.08)

TMCC1-AS1

1.75

 

CD27-AS1

1.7

D (0.71)

FRMD6-AS1

1.62

 

TRHDE-AS1

1.59

 

URB1-AS1

1.56

 
  1. Note: D, directly related to psoriasis according to the GeneCards database; I, indirectly related to psoriasis according to the GeneCards database. The confidence scores are indicative of how much evidence supports the biological relevance, with a higher value corresponding to a stronger support
  2. aA self-defined score is calculated as the sum of absolute weights over the replicates of iCluster modeling, which is used to determine if a certain gene should be selected in the final model. For more details, please refer to the “Materials and Methods” section
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Human Genomics

ISSN: 1479-7364