Gene** | AD condition | Variant*** | Variant type | Allele count (< 35% of reads) | COSMIC | ||||
---|---|---|---|---|---|---|---|---|---|
ExAC | gnomAD | AA mutation | Confirmed somatic | No. of samples | Samples being ‘hematopoietic and lymphoid’ | ||||
ASXL1 *▲ | Bohring–Opitz syndrome | NM_015338.5:c.1210C>T► | Nonsense | 3 | 3 | p.R404* | Yes | 10 | 90.0% |
NM_015338.5:c.2893C>Tâ–º | Nonsense | 1 | 2 | p.R965* | Yes | 17 | 70.6% | ||
NM_015338.5:c.1117C>T► | Nonsense | 0 | 2 | – | – | – | – | ||
BRAF*∆ | Cardio-facio-cutaneous | NM_004333.5:c.1799T>A► | Missense | 1 | 2 | p.V600E | Yes | 29,274 | 3.0% |
syndrome | NM_004333.5:c.1406G>A | Missense | 1 | 0 | p.G469E | Yes | 28 | 0.0% | |
CBL* | Noonan syndrome-like disorder with or without juvenile myelomonocytic leukemia | NM_005188.3:c.1186T>C | Missense | 1 | 0 | p.C396R | Yes | 13 | 100.0% |
NM_005188.3:c.1259G>Aâ–º | Missense | 2 | 2 | p.R420Q | Yes | 27 | 77.8% | ||
NM_005188.3:c.1111T>Câ–º | Missense | 1 | 2 | p.Y371H | Yes | 30 | 96.7% | ||
DNMT3A* | Tatton–Brown–Rahman syndrome | NM_022552.5:c.2312G>A► | Missense | 3 | 2 | p.R771Q | Yes | 8 | 50.0% |
NM_022552.5:c.2644C>Tâ–º | Missense | 4 | 3 | p.R882C | Yes | 398 | 98.5% | ||
NM_022552.5:c.2536C>T | Nonsense | 1 | 0 | p.Q846* | No | 1 | 100.0% | ||
FGFR3▲∆ | LADD syndrome/Thanatophoric dysplasia, type I | NM_000142.5:c.1537G>A | Missense | 1 | 0 | – | – | – | – |
NM_000142.5:c.746C>Gâ–º | Missense | 1 | 0 | p.S249C | Yes | 1,525 | 0.0% | ||
IDH2*∆ | D-2-hydroxyglutaric aciduria 2 | NM_001289910.1:c.263G>A | Missense | 4 | 3 | – | – | – | – |
KRAS*∆ | Noonan syndrome 3/RAS-associated autoimmune leukoproliferative disorder | NM_004985.4:c.40G>A► | Missense | 1 | 0 | p.V14I | Yes | 34 | 14.71% |
NM_004985.4:c.35G>Aâ–º | Missense | 1 | 1 | p.G12D | Yes | 15,834 | 1.67% | ||
PTPN11* | Noonan syndrome 1 | NM_002834.5:c.1471C>T► | Missense | 1 | NA | – | – | – | – |
NM_002834.5:c.794G>Aâ–º | Missense | 1 | 0 | p.R265Q | Yes | 4 | 100.0% | ||
NM_002834.5:c.188A>Gâ–º | Missense | 0 | 1 | p.Y63C | No | 4 | 100.0% | ||
SETBP1 | Schinzel–Giedion midface retraction syndrome | NM_015559.3:c.2608G>A► | Missense | 2 | 1 | p.G870S | Yes | 72 | 98.61% |