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Table 3 The relationship between adjusted metabolites and metabolic genes in the same metabolic pathway

From: Controlling the confounding effect of metabolic gene expression to identify actual metabolite targets in microsatellite instability cancers

Features

Metabolic pathway

Associated genes

Hippurate

Metabolism of amino acids

QDPR/FAH/PAOX/MPST/SLC7A5

3-phosphoglycerate

Metabolism of carbohydrates

ST3GAL2/PFKP/HS3ST1/HPSE/PGM1

C14:0 CE

Metabolism of lipids

AGPS/SGPP1/SQLE/EPHX2

C18:0 LPE

Metabolism of lipids

PTGS1/CHPT1/SC5D/PLA2G3/DHCR24

6-phosphogluconate

Metabolism of carbohydrates

B4GALT2/PFKFB2/PPP1R3C/SLC25A13/IDUA

C36:1 PC

Metabolism of lipids

CYP51A1/CERS6/PTGS1/PLA2G3/CERS4/SQLE

Glutathione reduced

Metabolism of amino acids

MRI1/FAH/GAMT/PAOX/CHDH/CDO1

Sarcosine

Metabolism of amino acids

ALDH4A1/GPT2/AGMAT/ASL/AADAT/MPST

  1. CE Cholesterol ester, LPE Lysophosphatidylethanolamine, PC Phosphatidylcholine