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Table 3 Mutation analysis in sequences detected in our wastewater surveillance study

From: Monitoring SARS-CoV-2 variants in wastewater of Dhaka City, Bangladesh: approach to complement public health surveillance systems

Sample ID

GISAID Accession number

Genome size (bp)

Amino acid mutations

030106

EPI_ISL_17398164

29,847

NSP2:I120F; NSP3:A1766V, P1228L, P77L; NSP4:A446V; NSP12:P323L; Spike:D614G; N:R203K, G204R

0101244

EPI_ISL_17398165

29,851

NSP2:I120F; NSP3:A1941T; NSP4:A446V, NSP12:P323L; NSP15:D128E; NSP16:T117I; Spike:D614G; T676I; NS3:W193R; N:R203K G204R

0101082

EPI_ISL_17398166

29,839

NSP2:I120F, W450C; NSP3:S1296F; NSP12:P323L NSP13:E261D; Spike:D614G, Q677H, T719I; N:R203K, G204R

0101142

EPI_ISL_17398167

29,878

NSP2:I120F; NS3:T223I; NSP6:V149F; NSP12:P323L; NSP15:T33I M:A142V; Spike:D614G; N:R203K, G204R

030105

EPI_ISL_17398168

29,865

NSP2:P129L; NSP3:P822L; NSP4:A446V; NSP12:P323L Spike:D614G; M:I82T; N:R203K G204R

0101309

EPI_ISL_17398169

29,878

NSP2:P129L; NS3:S26L; NSP4:A446V; NSP12:P323L; Spike:D614G, P681R; N:R203K, G204R

0401132

EPI_ISL_17398170

29,838

NSP3:M1547I; NSP4:A446V; NSP5:P99L; NSP6:T77A; NSP12:P323L, G671S; Spike:D614G; N:R203M

202,080

EPI_ISL_17398171

29,771

NSP3:P1228L, A488S, V1234L, P1469S; NSP4:V167L, T492I; NSP6:A76V, T77A; NS7b:T40I; NSP8:P183L NSP12:P323L, G671S; NSP13:P77L; NSP14:A394V Spike: T19R, E156G, R158del, F157del, G142D, D614G, P681R; M:I82T; N:G215C R203M, D377Y

0102275

EPI_ISL_17398172

29,845

NSP1:R24C; NSP2:I120F; Spike:T19R, A222S, D614G, P681R, A924S; N:R203K G204R

0102089

EPI_ISL_17398173

29,771

NSP3: S26L, H682Y; NSP4:T492I; NSP6:V149A; NSP12: T51I P323L G671S; NSP13:P77L, V558L; NSP15:H234Y; Spike: T19R, E156G, G142D, F157del, R158del, D614G, P681R; M:I82T; N:G215C, R203M