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Table 5 Calculation of choroidal neovascular disease risk score: S = intercept + ∑ i = 1 13 β i * X i , where β and X are as follows

From: Clinical validation of a genetic model to estimate the risk of developing choroidal neovascular age-related macular degeneration

Parameter

Regression

coefficient

p-value

X

Point

estimate

95% Wald

confidence

limits

Pra > Chisq

Intercept

0.7851

0.1885

1

--

--

--

--

rs10490924

1.4537

<0.0001

GG = 0, GT = 1, TT = 2

4.279

3.346

5.472

<0.0001

rs1061170

-0.7687

0.0105

CT = 1, CC = 0, TT = 2

0.464

0.257

0.835

0.0105

rs10922153

-0.6018

0.1129

GT = 1, GG = 0, TT = 2

0.548

0.26

1.153

0.1129

rs12144939

-0.1974

0.4375

GG = 0, GT = 1, TT = 2

0.821

0.499

1.351

0.4375

rs1409153

-0.1595

0.5665

AG = 1, GG = 0, AA = 2

0.853

0.494

1.471

0.5665

rs1750311

-0.1316

0.6834

CC = 0, AC = 1, AA = 2

0.877

0.466

1.65

0.6834

rs2230199

0.428

0.0009

CC = 0, CG = 1, GG = 2

1.534

1.192

1.975

0.0009

rs2274700

-0.7954

0.0002

GG = 0, AG = 1, AA = 2

0.451

0.296

0.689

0.0002

rs2990510

-0.4596

0.1358

GT = 1, TT = 0, GG = 2

0.632

0.345

1.155

0.1358

rs403846

0.8131

0.0404

AG = 1, AA = 0, GG = 2

2.255

1.036

4.906

0.0404

rs641153

-0.8243

<0.0001

CC = 0, CT = 1, TT = 2

0.439

0.295

0.651

<0.0001

rs698859

-0.015

0.9559

AG = 1, GG = 0, AA = 2

0.985

0.58

1.673

0.9559

rs9332739

-0.9544

0.0027

GG = 0, CG = 1, CC = 2

0.385

0.206

0.719

0.0027

  1. a The probability of risk = exp(risk score)/[1 +exp(risk score)]